RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 SAR1AQ9NR31 198 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 PJA2O43164 708 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 CD19P15391 556 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 MARK3P27448 753 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 STIP1P31948 543 aaKnown RBP9.35□□□□□ -0.91
COL6A5-202ENST00000312481 PRELPP51888 382 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 CTDSPL2Q05D32 466 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 CUL3Q13618 768 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 MXD4Q14582 209 aaPredicted RBP9.35□□□□□ -0.91
COL6A5-202ENST00000312481 SYDE2Q5VT97 1194 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 KCTD6Q8NC69 237 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 KMT5AQ9NQR1 393 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 MAPRE3Q9UPY8 281 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 HPSEQ9Y251 543 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 PCDHB4Q9Y5E5 795 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 LOC102724428A0A0B4J2F2 783 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 SIK1P57059 783 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 FAM43BQ6ZT52 329 aaPredicted RBP9.35□□□□□ -0.91
COL6A5-202ENST00000312481 RSRC2Q7L4I2 434 aaKnown RBP9.35□□□□□ -0.91
COL6A5-202ENST00000312481 CXorf38Q8TB03 319 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 TRERF1Q96PN7 1200 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 RANBP17Q9H2T7 1088 aaKnown RBP9.35□□□□□ -0.91
COL6A5-202ENST00000312481 CAPN9O14815 690 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 PALMO75781 387 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 APOA1P02647 267 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 PICALMQ13492 652 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 CAPRIN1Q14444 709 aaKnown RBP9.35□□□□□ -0.91
COL6A5-202ENST00000312481 LINC00523Q86TU6 105 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 PHF20Q9BVI0 1012 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 CEP44Q9C0F1 390 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 LRRC37A3O60309 1634 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 RGPD1P0DJD0 1748 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 E9PMD0 336 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 PPIP5K2O43314 1243 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 ZBED1O96006 694 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 LCA5Q86VQ0 697 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 STK38LQ9Y2H1 464 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 SASH1O94885 1247 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 TMEM253P0C7T8 217 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 YWHAGP61981 247 aaKnown RBP eCLIP9.35□□□□□ -0.91
COL6A5-202ENST00000312481 TGFBRAP1Q8WUH2 860 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 ERP44Q9BS26 406 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 ROBO3Q96MS0 1386 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 SIGLEC1Q9BZZ2 1709 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 DEAF1O75398 565 aaPredicted RBP9.35□□□□□ -0.91
COL6A5-202ENST00000312481 CYP2J2P51589 502 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 CCDC92Q53HC0 331 aaPredicted RBP9.35□□□□□ -0.91
COL6A5-202ENST00000312481 XKR9Q5GH70 373 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 KIAA1755Q5JYT7 1200 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 PRMT9Q6P2P2 845 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 NOA1Q8NC60 698 aaKnown RBP9.35□□□□□ -0.91
COL6A5-202ENST00000312481 TRPC4APQ8TEL6 797 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 SCFD1Q8WVM8 642 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 APEX2Q9UBZ4 518 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 DDX60Q8IY21 1712 aaKnown RBP9.35□□□□□ -0.91
COL6A5-202ENST00000312481 ABCB4P21439 1286 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 NUP107P57740 925 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 ATXN2LQ8WWM7 1075 aaKnown RBP9.34□□□□□ -0.91
COL6A5-202ENST00000312481 CYP2C8P10632 490 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 IL10P22301 178 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 FBXL13Q8NEE6 735 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 PPWD1Q96BP3 646 aaKnown RBP9.34□□□□□ -0.91
COL6A5-202ENST00000312481 LRRC10BA6NIK2 292 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 SPATA21Q7Z572 469 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 PAWRQ96IZ0 340 aaKnown RBP9.34□□□□□ -0.91
COL6A5-202ENST00000312481 ASPSCR1Q9BZE9 553 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 TRIM31Q9BZY9 425 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 BLZF1Q9H2G9 400 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 IGSF9BQ9UPX0 1349 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 MAST2Q6P0Q8 1798 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 HAUS5O94927 633 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 FSBPO95073 299 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 GRAPQ13588 217 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 CCDC137Q6PK04 289 aaKnown RBP9.34□□□□□ -0.91
COL6A5-202ENST00000312481 GRAPLQ8TC17 118 aaPredicted RBP9.34□□□□□ -0.91
COL6A5-202ENST00000312481 OSBP2Q969R2 916 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 OSBPL8Q9BZF1 889 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 NRBP1Q9UHY1 535 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 FBXO2Q9UK22 296 aaPredicted RBP9.34□□□□□ -0.91
COL6A5-202ENST00000312481 TMCO1Q9UM00 188 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 FLT1P17948 1338 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 STAT3P40763 770 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 ACADSBP45954 432 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 SWT1Q5T5J6 900 aaKnown RBP9.34□□□□□ -0.91
COL6A5-202ENST00000312481 NLRP9Q7RTR0 991 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 ERICH1Q86X53 443 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 RTKN2Q8IZC4 609 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.34□□□□□ -0.91
COL6A5-202ENST00000312481 MAGEB18Q96M61 343 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 SAMSN1Q9NSI8 373 aaKnown RBP9.34□□□□□ -0.91
COL6A5-202ENST00000312481 MROH7-TTC4A0A0A0MT08 1334 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 RARGP13631 454 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 GARTP22102 1010 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 CDK16Q00536 496 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 HIC1Q14526 733 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 TAF12Q16514 161 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 KRT24Q2M2I5 525 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 TTLL11Q8NHH1 800 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 RNPC3Q96LT9 517 aaKnown RBP9.34□□□□□ -0.91
COL6A5-202ENST00000312481 FGD4Q96M96 766 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms