RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 NOD1Q9Y239 953 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 NR1I2O75469 434 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 EYA4O95677 639 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 TIMP1P01033 207 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 HNRNPCP07910 306 aaKnown RBP eCLIP9.06□□□□□ -0.96
CHD6-201ENST00000309279 CYP2C9P11712 490 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 MLLT1Q03111 559 aaPredicted RBP9.06□□□□□ -0.96
CHD6-201ENST00000309279 VAC14Q08AM6 782 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 TBC1D8BQ0IIM8 1120 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 MTERF2Q49AM1 385 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 ZNF394Q53GI3 561 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 XKR9Q5GH70 373 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 DNTTIP2Q5QJE6 756 aaKnown RBP9.06□□□□□ -0.96
CHD6-201ENST00000309279 RUFY4Q6ZNE9 571 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 CLEC17AQ6ZS10 378 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 KCNK18Q7Z418 384 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 C7orf61Q8IZ16 206 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 KIAA0319LQ8IZA0 1049 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 WNT8BQ93098 351 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 ZBTB10Q96DT7 871 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 CALML4Q96GE6 196 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 NOC4LQ9BVI4 516 aaKnown RBP9.06□□□□□ -0.96
CHD6-201ENST00000309279 NOVA2Q9UNW9 492 aaKnown RBP9.06□□□□□ -0.96
CHD6-201ENST00000309279 DNM3Q9UQ16 869 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 NR2E3Q9Y5X4 410 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 LAMA2P24043 3122 aaKnown RBP9.06□□□□□ -0.96
CHD6-201ENST00000309279 LTBP2Q14767 1821 aa9.06□□□□□ -0.96
CHD6-201ENST00000309279 A0A087WWV3 80 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 E9PMD0 336 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 GAS2O43903 313 aaKnown RBP9.05□□□□□ -0.96
CHD6-201ENST00000309279 DGAT1O75907 488 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 TPPPO94811 219 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 CKBP12277 381 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 RPL17P18621 184 aaKnown RBP9.05□□□□□ -0.96
CHD6-201ENST00000309279 CMA1P23946 247 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 ITGB8P26012 769 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 CLCN1P35523 988 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 TXLNAP40222 546 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 NFX1Q12986 1120 aaKnown RBP9.05□□□□□ -0.96
CHD6-201ENST00000309279 BFSP2Q13515 415 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 KARSQ15046 597 aaKnown RBP9.05□□□□□ -0.96
CHD6-201ENST00000309279 RESP18Q5W5W9 173 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 EFCAB12Q6NXP0 572 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 ZCCHC8Q6NZY4 707 aaKnown RBP9.05□□□□□ -0.96
CHD6-201ENST00000309279 TRAF7Q6Q0C0 670 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 C16orf54Q6UWD8 224 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 ZNF710Q8N1W2 664 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 CCDC155Q8N6L0 562 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 APPL2Q8NEU8 664 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 LRRC15Q8TF66 581 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 SLC7A3Q8WY07 619 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 SLX1AQ9BQ83 275 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 JPH2Q9BR39 696 aaPredicted RBP9.05□□□□□ -0.96
CHD6-201ENST00000309279 BHMT2Q9H2M3 363 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 TMX1Q9H3N1 280 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 HIPK3Q9H422 1215 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 BLOC1S4Q9NUP1 217 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 CCDC39Q9UFE4 941 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 FAM237AA0A1B0GTK4 181 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 A0A1W2PQ27 194 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 A0A1W2PQ64 194 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 A0A1W2PQD8 194 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 GPR37L1O60883 481 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 TCEA3O75764 348 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 PLCG1P19174 1290 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 TMOD1P28289 359 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 CDKN1CP49918 316 aaPredicted RBP9.05□□□□□ -0.96
CHD6-201ENST00000309279 FAM133BQ5BKY9 247 aaKnown RBP9.05□□□□□ -0.96
CHD6-201ENST00000309279 FAM26DQ5JW98 314 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 LMBRD2Q68DH5 695 aaPredicted RBP9.05□□□□□ -0.96
CHD6-201ENST00000309279 MFSD5Q6N075 450 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 RSPH3Q86UC2 560 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 METTL13Q8N6R0 699 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 ARL6IP6Q8N6S5 226 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 SYT2Q8N9I0 419 aaPredicted RBP9.05□□□□□ -0.96
CHD6-201ENST00000309279 DNAJB3Q8WWF6 145 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 CDK5RAP3Q96JB5 506 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 FAM161BQ96MY7 647 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 XPNPEP1Q9NQW7 623 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 LUZP4Q9P127 313 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 STK17AQ9UEE5 414 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 RABL2BQ9UNT1 228 aa9.05□□□□□ -0.96
CHD6-201ENST00000309279 TET1Q8NFU7 2136 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 TANC1Q9C0D5 1861 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 SIP14410 1827 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 A0A087X0B3 334 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 ARHGEF35A5YM69 484 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 CHRNA1P02708 482 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 IQCF3P0C7M6 154 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 RAG1P15918 1043 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 SELPP16109 830 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 CYP11B2P19099 503 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 THPOP40225 353 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 DNM2P50570 870 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 CLCN3P51790 818 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 POLGP54098 1239 aaPredicted RBP9.04□□□□□ -0.96
CHD6-201ENST00000309279 SLC12A3P55017 1021 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 CDC42EP1Q00587 391 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 DRP2Q13474 957 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 EMC2Q15006 297 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms