RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 FKBP15Q5T1M5 1219 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 XXYLT1Q8NBI6 393 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 RDH13Q8NBN7 331 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 PLEKHO2Q8TD55 490 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 LMBR1Q8WVP7 490 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 SAAL1Q96ER3 474 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 HAPLN2Q9GZV7 340 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 UPF3AQ9H1J1 476 aaKnown RBP7.6□□□□□ -1.19
PTCD2-201ENST00000308077 TMX1Q9H3N1 280 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 TMEM134Q9H6X4 195 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 METTL14Q9HCE5 456 aaKnown RBP7.6□□□□□ -1.19
PTCD2-201ENST00000308077 SETD4Q9NVD3 440 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 KCNG1Q9UIX4 513 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 FRMD4BQ9Y2L6 1034 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.6□□□□□ -1.19
PTCD2-201ENST00000308077 TRIP12Q14669 1992 aaPredicted RBP7.6□□□□□ -1.19
PTCD2-201ENST00000308077 UNC80Q8N2C7 3258 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 TTC26A0AVF1 554 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 K7ERI5 159 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 MAGEB2O15479 319 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 SEPT4O43236 478 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 MSCO60682 206 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 TRIM49P0CI25 452 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 TRIM49CP0CI26 452 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 SKILP12757 684 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 PRKAR2AP13861 404 aaKnown RBP7.6□□□□□ -1.19
PTCD2-201ENST00000308077 ABCD1P33897 745 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 GJA9P57773 515 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 CHMP4BP1P59074 171 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 PURAQ00577 322 aaKnown RBP7.6□□□□□ -1.19
PTCD2-201ENST00000308077 APBA1Q02410 837 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 TRIM14Q14142 442 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 TCERG1LQ5VWI1 586 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 DPY19L2P1Q6NXN4 242 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 PPFIBP1Q86W92 1011 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 CBWD2Q8IUF1 395 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 RETREG2Q8NC44 543 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 BICD1Q96G01 975 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 ZBTB45Q96K62 511 aaPredicted RBP7.6□□□□□ -1.19
PTCD2-201ENST00000308077 NLRP4Q96MN2 994 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 PPP1R16BQ96T49 567 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 TARS2Q9BW92 718 aaKnown RBP7.6□□□□□ -1.19
PTCD2-201ENST00000308077 MINDY3Q9H8M7 445 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 STYXL1Q9Y6J8 313 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 SCN10AQ9Y5Y9 1956 aa7.6□□□□□ -1.19
PTCD2-201ENST00000308077 FRMPD3Q5JV73 1810 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 MAPK13O15264 365 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 PGK1P00558 417 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 AFPP02771 609 aaKnown RBP7.59□□□□□ -1.19
PTCD2-201ENST00000308077 VTNP04004 478 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 C6orf222P0C671 652 aaPredicted RBP7.59□□□□□ -1.19
PTCD2-201ENST00000308077 GARTP22102 1010 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 SCP2P22307 547 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 LIG4P49917 911 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 PTENP60484 403 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 DLG4P78352 724 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 ADAM17P78536 824 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 PPP2R3AQ06190 1150 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 BFSP1Q12934 665 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 STRN3Q13033 797 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 C1orf220Q5T0J3 134 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 MAP3K21Q5TCX8 1036 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 KIAA1524Q8TCG1 905 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 ZNF296Q8WUU4 475 aaPredicted RBP7.59□□□□□ -1.19
PTCD2-201ENST00000308077 POMGNT1Q8WZA1 660 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 FBXL18Q96ME1 805 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 CRACR2AQ9BSW2 395 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 IFT122Q9HBG6 1241 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 FAM207AQ9NSI2 230 aaPredicted RBP7.59□□□□□ -1.19
PTCD2-201ENST00000308077 ABHD10Q9NUJ1 306 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 AGPAT5Q9NUQ2 364 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 CAPN11Q9UMQ6 739 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 AKT3Q9Y243 479 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 NRCAMQ92823 1304 aa7.59□□□□□ -1.19
PTCD2-201ENST00000308077 MBLAC1A4D2B0 266 aaPredicted RBP7.59□□□□□ -1.2
PTCD2-201ENST00000308077 RRN3P2A6NIE6 340 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 ABLIM1O14639 778 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 ASAP2O43150 1006 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 FKTNO75072 461 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 ADAMTS4O75173 837 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 NOL4O94818 638 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 HMGCRP04035 888 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 PRKCBP05771 671 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 IQCF3P0C7M6 154 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 MSNP26038 577 aaKnown RBP7.59□□□□□ -1.2
PTCD2-201ENST00000308077 HOXD10P28358 340 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 CLCN1P35523 988 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 EFNA5P52803 228 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 MCCD1P59942 119 aaPredicted RBP7.59□□□□□ -1.2
PTCD2-201ENST00000308077 NKX3-2P78367 333 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 ZNF200P98182 395 aaPredicted RBP7.59□□□□□ -1.2
PTCD2-201ENST00000308077 MBTD1Q05BQ5 628 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 TFDP1Q14186 410 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 SNRNP35Q16560 246 aaKnown RBP7.59□□□□□ -1.2
PTCD2-201ENST00000308077 CBWD6Q4V339 395 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 FIGNQ5HY92 759 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 CBWD3Q5JTY5 395 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 CBWD5Q5RIA9 395 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 NFRKBQ6P4R8 1299 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 RUFY4Q6ZNE9 571 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms