RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 PFASO15067 1338 aa12.59□□□□□ -0.39
FOXP4-201ENST00000307972 IGKV6D-41A0A0C4DH26 115 aa12.59□□□□□ -0.39
FOXP4-201ENST00000307972 A0A1W2PRG0 241 aa12.59□□□□□ -0.39
FOXP4-201ENST00000307972 SKAP2O75563 359 aaPredicted RBP12.59□□□□□ -0.39
FOXP4-201ENST00000307972 BRAFP15056 766 aa12.59□□□□□ -0.39
FOXP4-201ENST00000307972 PTGIRP43119 386 aa12.59□□□□□ -0.39
FOXP4-201ENST00000307972 GCLMP48507 274 aa12.59□□□□□ -0.39
FOXP4-201ENST00000307972 CERKLQ49MI3 558 aaPredicted RBP12.59□□□□□ -0.39
FOXP4-201ENST00000307972 PHLDB3Q6NSJ2 640 aa12.59□□□□□ -0.39
FOXP4-201ENST00000307972 SPATA21Q7Z572 469 aa12.59□□□□□ -0.39
FOXP4-201ENST00000307972 PRCCQ92733 491 aaPredicted RBP12.59□□□□□ -0.39
FOXP4-201ENST00000307972 ZNF653Q96CK0 615 aa12.59□□□□□ -0.39
FOXP4-201ENST00000307972 RBM17Q96I25 401 aaKnown RBP12.59□□□□□ -0.39
FOXP4-201ENST00000307972 CCDC17Q96LX7 622 aa12.59□□□□□ -0.39
FOXP4-201ENST00000307972 AFF2P51816 1311 aa12.59□□□□□ -0.39
FOXP4-201ENST00000307972 EMSYQ7Z589 1322 aa12.59□□□□□ -0.39
FOXP4-201ENST00000307972 ARHGEF35A5YM69 484 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 GAS7O60861 476 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 GGPS1O95749 300 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 COPS2P61201 443 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 GRIPAP1Q4V328 841 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 EP400NLQ6ZTU2 488 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 INTS8Q75QN2 995 aaKnown RBP12.58□□□□□ -0.4
FOXP4-201ENST00000307972 PTF1AQ7RTS3 328 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 SLC13A5Q86YT5 568 aaPredicted RBP12.58□□□□□ -0.4
FOXP4-201ENST00000307972 WNT8AQ9H1J5 351 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 PCYOX1Q9UHG3 505 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 C15orf41Q9Y2V0 281 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 TCRBV7S2A1N4TA0A589 114 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 K7ENM7 598 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 ZNF131P52739 623 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 CACNB3P54284 484 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 RWDD2BP57060 319 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 KRT17Q04695 432 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 ICA1Q05084 483 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 Q4G0T1 1027 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 CRELD2Q6UXH1 353 aaPredicted RBP12.58□□□□□ -0.4
FOXP4-201ENST00000307972 ZNF564Q8TBZ8 553 aaPredicted RBP12.58□□□□□ -0.4
FOXP4-201ENST00000307972 TGS1Q96RS0 853 aaKnown RBP12.58□□□□□ -0.4
FOXP4-201ENST00000307972 POP1Q99575 1024 aaKnown RBP12.58□□□□□ -0.4
FOXP4-201ENST00000307972 NUP85Q9BW27 656 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 ROPN1BQ9BZX4 212 aaPredicted RBP12.58□□□□□ -0.4
FOXP4-201ENST00000307972 ROPN1Q9HAT0 212 aaPredicted RBP12.58□□□□□ -0.4
FOXP4-201ENST00000307972 ARL2BPQ9Y2Y0 163 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 PLIN4Q96Q06 1357 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 DDX60LQ5H9U9 1706 aaKnown RBP12.58□□□□□ -0.4
FOXP4-201ENST00000307972 ANKRD63C9JTQ0 380 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 GCKP35557 465 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 NCALDP61601 193 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 ZFYVE27Q5T4F4 411 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 C11orf63Q6NUN7 778 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 TRMT10CQ7L0Y3 403 aaKnown RBP12.58□□□□□ -0.4
FOXP4-201ENST00000307972 VSIG1Q86XK7 387 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 TBC1D16Q8TBP0 767 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 FBF1Q8TES7 1133 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 PLCD4Q9BRC7 762 aa12.58□□□□□ -0.4
FOXP4-201ENST00000307972 POLR3CQ9BUI4 534 aaPredicted RBP12.58□□□□□ -0.4
FOXP4-201ENST00000307972 ZC3H12CQ9C0D7 883 aaKnown RBP12.58□□□□□ -0.4
FOXP4-201ENST00000307972 CLDN3O15551 220 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 RTN2O75298 545 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 CREB1P16220 341 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 ADCY8P40145 1251 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 FAM47EQ6ZV65 393 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 SRRM1Q8IYB3 904 aaKnown RBP12.57□□□□□ -0.4
FOXP4-201ENST00000307972 DCAF4Q8WV16 495 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 CCDC77Q9BR77 488 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 POLLQ9UGP5 575 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 DDX39AO00148 427 aaKnown RBP12.57□□□□□ -0.4
FOXP4-201ENST00000307972 RARAP10276 462 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 SSR1P43307 286 aaKnown RBP12.57□□□□□ -0.4
FOXP4-201ENST00000307972 KYNUQ16719 465 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 PKD2L1Q9P0L9 805 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 CTNNAL1Q9UBT7 734 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 COL14A1Q05707 1796 aaKnown RBP12.57□□□□□ -0.4
FOXP4-201ENST00000307972 FOXO6A8MYZ6 492 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 GAS8O95995 478 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 CDC25CP30307 473 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 SREBF1P36956 1147 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 PEX19P40855 299 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 SETDB1Q15047 1291 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 RC3H1Q5TC82 1133 aaKnown RBP12.57□□□□□ -0.4
FOXP4-201ENST00000307972 CYFIP1Q7L576 1253 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 ZNF720Q7Z2F6 126 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 SPDL1Q96EA4 605 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 RPS6KC1Q96S38 1066 aa12.57□□□□□ -0.4
FOXP4-201ENST00000307972 F5H6K3 240 aa12.56□□□□□ -0.4
FOXP4-201ENST00000307972 GDF11O95390 407 aa12.56□□□□□ -0.4
FOXP4-201ENST00000307972 CTNNA2P26232 953 aa12.56□□□□□ -0.4
FOXP4-201ENST00000307972 POLD1P28340 1107 aa12.56□□□□□ -0.4
FOXP4-201ENST00000307972 RIPK1Q13546 671 aa12.56□□□□□ -0.4
FOXP4-201ENST00000307972 KIF22Q14807 665 aa12.56□□□□□ -0.4
FOXP4-201ENST00000307972 DOK7Q18PE1 504 aa12.56□□□□□ -0.4
FOXP4-201ENST00000307972 TBC1D10BQ4KMP7 808 aaPredicted RBP12.56□□□□□ -0.4
FOXP4-201ENST00000307972 FAM182BQ5T319 152 aa12.56□□□□□ -0.4
FOXP4-201ENST00000307972 SPICE1Q8N0Z3 855 aa12.56□□□□□ -0.4
FOXP4-201ENST00000307972 KCNV2Q8TDN2 545 aa12.56□□□□□ -0.4
FOXP4-201ENST00000307972 BORCS6Q96GS4 357 aa12.56□□□□□ -0.4
FOXP4-201ENST00000307972 MBOAT7Q96N66 472 aa12.56□□□□□ -0.4
FOXP4-201ENST00000307972 PNMA3Q9UL41 463 aa12.56□□□□□ -0.4
FOXP4-201ENST00000307972 CCND1P24385 295 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms