RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 VAV2P52735 878 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 DLG4P78352 724 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 CAPSQ13938 189 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 SPA17Q15506 151 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 ASIC2Q16515 512 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 IER5Q5VY09 327 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 KIAA1328Q86T90 577 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 DPP9Q86TI2 863 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 CBWD2Q8IUF1 395 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 LMO3Q8TAP4 145 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 DEPTORQ8TB45 409 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 TMC2Q8TDI7 906 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 JAKMIP2Q96AA8 810 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 INTS2Q9H0H0 1204 aaKnown RBP12.92□□□□□ -0.34
TRIM40-205ENST00000307859 DEF6Q9H4E7 631 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 TMEM134Q9H6X4 195 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 AJAP1Q9UKB5 411 aaPredicted RBP12.92□□□□□ -0.34
TRIM40-205ENST00000307859 STYXL1Q9Y6J8 313 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 LRRIQ4A6NIV6 560 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 KIAA0391O15091 583 aaKnown RBP12.91□□□□□ -0.34
TRIM40-205ENST00000307859 AKR1B10O60218 316 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 HBP1O60381 514 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 RFX1P22670 979 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 MARK3P27448 753 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 PRKCIP41743 596 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 PPP3CAQ08209 521 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 STRN3Q13033 797 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 EPC2Q52LR7 807 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 IQCEQ6IPM2 695 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 GPR153Q6NV75 609 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 IRF2BP2Q7Z5L9 587 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 GPD1LQ8N335 351 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 MSL3Q8N5Y2 521 aaKnown RBP12.91□□□□□ -0.34
TRIM40-205ENST00000307859 PPTC7Q8NI37 304 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 TCP11Q8WWU5 503 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 POMGNT1Q8WZA1 660 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 MFSD14AQ96MC6 490 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 SPAG5Q96R06 1193 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 USP20Q9Y2K6 914 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 GOLGA8IPA6NC78 632 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 RCCD1A6NED2 376 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 GOLGA8JA6NMD2 632 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 KRT86O43790 486 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 ADCY3O60266 1144 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 ADCYAP1R1P41586 468 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 LIG4P49917 911 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 CYP27A1Q02318 531 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
TRIM40-205ENST00000307859 DRP2Q13474 957 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 IRF5Q13568 498 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 TDRD12Q587J7 1177 aaKnown RBP12.91□□□□□ -0.34
TRIM40-205ENST00000307859 ZNF569Q5MCW4 686 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 MORN1Q5T089 497 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 CCDC122Q5T0U0 273 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 CDCA2Q69YH5 1023 aaPredicted RBP12.91□□□□□ -0.34
TRIM40-205ENST00000307859 NPLOC4Q8TAT6 608 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 DPF3Q92784 378 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 SAAL1Q96ER3 474 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 BICD1Q96G01 975 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 JPH2Q9BR39 696 aaPredicted RBP12.91□□□□□ -0.34
TRIM40-205ENST00000307859 TINF2Q9BSI4 451 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 TSGA10Q9BZW7 698 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 ABHD16BQ9H3Z7 469 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 ERAP1Q9NZ08 941 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 APEX2Q9UBZ4 518 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 TRIM10Q9UDY6 481 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 PCDHA13Q9Y5I0 950 aa12.91□□□□□ -0.34
TRIM40-205ENST00000307859 BZW2Q9Y6E2 419 aaKnown RBP12.91□□□□□ -0.34
TRIM40-205ENST00000307859 K7ERI5 159 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 PJA2O43164 708 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 LGALS2P05162 132 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 HOXD8P13378 290 aaPredicted RBP12.9□□□□□ -0.34
TRIM40-205ENST00000307859 ANXA13P27216 316 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 GTF2H1P32780 548 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 CYP24A1Q07973 514 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 KLHL30Q0D2K2 578 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 CRHR2Q13324 411 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 MXD4Q14582 209 aaPredicted RBP12.9□□□□□ -0.34
TRIM40-205ENST00000307859 GJC2Q5T442 439 aaPredicted RBP12.9□□□□□ -0.34
TRIM40-205ENST00000307859 GJB7Q6PEY0 223 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 SLC35F6Q8N357 371 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 EHBP1Q8NDI1 1231 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 PARD3BQ8TEW8 1205 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 PSPC1Q8WXF1 523 aaKnown RBP12.9□□□□□ -0.34
TRIM40-205ENST00000307859 HTATIP2Q9BUP3 242 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 STK33Q9BYT3 514 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 IFIH1Q9BYX4 1025 aaKnown RBP12.9□□□□□ -0.34
TRIM40-205ENST00000307859 LACRTQ9GZZ8 138 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 TMEM117Q9H0C3 514 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 CCDC113Q9H0I3 377 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 KIAA1586Q9HCI6 787 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 SLC5A4Q9NY91 659 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 CPA4Q9UI42 421 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 NR2E3Q9Y5X4 410 aa12.9□□□□□ -0.34
TRIM40-205ENST00000307859 COL1A2P08123 1366 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 LRRIQ3A6PVS8 624 aaPredicted RBP12.89□□□□□ -0.35
TRIM40-205ENST00000307859 F8VZ95 297 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 EXTL3O43909 919 aa12.89□□□□□ -0.35
TRIM40-205ENST00000307859 URI1O94763 535 aaPredicted RBP12.89□□□□□ -0.35
TRIM40-205ENST00000307859 SLU7O95391 586 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms