RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 ASAP2O43150 1006 aa14.38□□□□□ -0.11
SEC23A-201ENST00000307712 RTN2O75298 545 aa14.38□□□□□ -0.11
SEC23A-201ENST00000307712 RARGP13631 454 aa14.38□□□□□ -0.11
SEC23A-201ENST00000307712 SATB1Q01826 763 aa14.38□□□□□ -0.11
SEC23A-201ENST00000307712 AOC3Q16853 763 aa14.38□□□□□ -0.11
SEC23A-201ENST00000307712 AADACL2Q6P093 401 aa14.38□□□□□ -0.11
SEC23A-201ENST00000307712 SLC13A5Q86YT5 568 aaPredicted RBP14.38□□□□□ -0.11
SEC23A-201ENST00000307712 AGAP11Q8TF27 550 aa14.38□□□□□ -0.11
SEC23A-201ENST00000307712 PYROXD1Q8WU10 500 aa14.38□□□□□ -0.11
SEC23A-201ENST00000307712 SCFD2Q8WU76 684 aa14.38□□□□□ -0.11
SEC23A-201ENST00000307712 ATG4AQ8WYN0 398 aa14.38□□□□□ -0.11
SEC23A-201ENST00000307712 MAML1Q92585 1016 aa14.38□□□□□ -0.11
SEC23A-201ENST00000307712 SH3GL3Q99963 347 aa14.38□□□□□ -0.11
SEC23A-201ENST00000307712 TRABDQ9H4I3 376 aa14.38□□□□□ -0.11
SEC23A-201ENST00000307712 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.37□□□□□ -0.11
SEC23A-201ENST00000307712 SORBS3O60504 671 aa14.37□□□□□ -0.11
SEC23A-201ENST00000307712 KCNJ2P63252 427 aa14.37□□□□□ -0.11
SEC23A-201ENST00000307712 FAM182BQ5T319 152 aa14.37□□□□□ -0.11
SEC23A-201ENST00000307712 LGSNQ5TDP6 509 aa14.37□□□□□ -0.11
SEC23A-201ENST00000307712 C11orf70Q9BRQ4 267 aa14.37□□□□□ -0.11
SEC23A-201ENST00000307712 TRIM55Q9BYV6 548 aa14.37□□□□□ -0.11
SEC23A-201ENST00000307712 CDC42EP4Q9H3Q1 356 aaKnown RBP14.37□□□□□ -0.11
SEC23A-201ENST00000307712 DNAJC8O75937 253 aaPredicted RBP14.37□□□□□ -0.11
SEC23A-201ENST00000307712 HAUS5O94927 633 aa14.37□□□□□ -0.11
SEC23A-201ENST00000307712 RPL21P46778 160 aaKnown RBP14.37□□□□□ -0.11
SEC23A-201ENST00000307712 ITGA8P53708 1063 aa14.37□□□□□ -0.11
SEC23A-201ENST00000307712 APBB1IPQ7Z5R6 666 aaPredicted RBP14.37□□□□□ -0.11
SEC23A-201ENST00000307712 TESPA1A2RU30 521 aaPredicted RBP14.37□□□□□ -0.11
SEC23A-201ENST00000307712 GOLGA8RI6L899 631 aa14.37□□□□□ -0.11
SEC23A-201ENST00000307712 NKRFO15226 690 aaKnown RBP eCLIP14.37□□□□□ -0.115e-14■□□□□ 8.7
SEC23A-201ENST00000307712 CAV1Q03135 178 aa14.37□□□□□ -0.11
SEC23A-201ENST00000307712 PADI6Q6TGC4 694 aa14.37□□□□□ -0.11
SEC23A-201ENST00000307712 CHURC1Q8WUH1 139 aa14.37□□□□□ -0.11
SEC23A-201ENST00000307712 SLC4A9Q96Q91 983 aa14.37□□□□□ -0.11
SEC23A-201ENST00000307712 RBM15Q96T37 977 aaKnown RBP eCLIP14.37□□□□□ -0.111e-6■■■■□ 23.4
SEC23A-201ENST00000307712 ZSWIM1Q9BR11 485 aa14.37□□□□□ -0.11
SEC23A-201ENST00000307712 VCX3BQ9H321 246 aa14.37□□□□□ -0.11
SEC23A-201ENST00000307712 GINM1Q9NU53 330 aa14.37□□□□□ -0.11
SEC23A-201ENST00000307712 HAO1Q9UJM8 370 aa14.37□□□□□ -0.11
SEC23A-201ENST00000307712 MRPL11Q9Y3B7 192 aaKnown RBP14.37□□□□□ -0.11
SEC23A-201ENST00000307712 FAM47DPA6NHR8 397 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 ITIH2P19823 946 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 RPA1P27694 616 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 MTM1Q13496 603 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 GIT2Q14161 759 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 ACCSLQ4AC99 568 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 INTS5Q6P9B9 1019 aaKnown RBP14.36□□□□□ -0.11
SEC23A-201ENST00000307712 SLC30A9Q6PML9 568 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 CENPUQ71F23 418 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 OGFOD1Q8N543 542 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 RUSC1Q9BVN2 902 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 SRRM3A6NNA2 597 aaPredicted RBP14.36□□□□□ -0.11
SEC23A-201ENST00000307712 SSTR3P32745 418 aaPredicted RBP14.36□□□□□ -0.11
SEC23A-201ENST00000307712 LIG4P49917 911 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 BPIFB4P59827 614 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 BASP1P80723 227 aaKnown RBP14.36□□□□□ -0.11
SEC23A-201ENST00000307712 KLC1Q07866 573 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 DMP1Q13316 513 aaPredicted RBP14.36□□□□□ -0.11
SEC23A-201ENST00000307712 TRPC3Q13507 836 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 NFIXQ14938 502 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 ZBED8Q8IZ13 594 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 CES2O00748 559 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 ALAS1P13196 640 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 GPS1Q13098 491 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 STAT4Q14765 748 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 BRDTQ58F21 947 aaPredicted RBP14.36□□□□□ -0.11
SEC23A-201ENST00000307712 CASC4Q6P4E1 433 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 SEPT14Q6ZU15 432 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 EIF1ADQ8N9N8 165 aaKnown RBP14.36□□□□□ -0.11
SEC23A-201ENST00000307712 ATL2Q8NHH9 583 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 ARHGEF26Q96DR7 871 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 MTMR9Q96QG7 549 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 NPHS2Q9NP85 383 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 ADAM22Q9P0K1 906 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 MCM8Q9UJA3 840 aa14.36□□□□□ -0.11
SEC23A-201ENST00000307712 PIK3CAP42336 1068 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 SLC8A3P57103 927 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 EPC2Q52LR7 807 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 TMEM154Q6P9G4 183 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 AGGF1Q8N302 714 aaeCLIP14.35□□□□□ -0.11
SEC23A-201ENST00000307712 SLC20A1Q8WUM9 679 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 PGM2Q96G03 612 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 TRAIPQ9BWF2 469 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 PI4K2BG5E9Z4 385 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 PPP1R12AO14974 1030 aaPredicted RBP14.35□□□□□ -0.11
SEC23A-201ENST00000307712 SLC16A4O15374 487 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 CASP5P51878 434 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 NPEPPSP55786 919 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 DNAJC19Q96DA6 116 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 TTC1Q99614 292 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 UBN1Q9NPG3 1134 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 KLHL11Q9NVR0 708 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 DLGAP2Q9P1A6 1054 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 PPARGC1AQ9UBK2 798 aaKnown RBP14.35□□□□□ -0.11
SEC23A-201ENST00000307712 A0A0A6YYK5 440 aaPredicted RBP14.35□□□□□ -0.11
SEC23A-201ENST00000307712 F5H6K3 240 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 LCA5LO95447 670 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 SERPINB6P35237 376 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 KLRC3Q07444 240 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 SLC30A10Q6XR72 485 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms