RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 VIL1P09327 827 aaKnown RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 TSHRP16473 764 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 INPP1P49441 399 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 FXR2P51116 673 aaKnown RBP eCLIP4.26□□□□□ -1.73
USH2A-201ENST00000307340 HSD17B4P51659 736 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 RCOR2Q8IZ40 523 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 SLC20A1Q8WUM9 679 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 CNOT6LQ96LI5 555 aaKnown RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 SYBUQ9NX95 663 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 DISP2A7MBM2 1401 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 BTNL10A8MVZ5 291 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 GRK2P25098 689 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 SOX6P35712 828 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 RFC5P40937 340 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 OAZ1P54368 228 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 KRT81Q14533 505 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 TRIM60Q495X7 471 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 RNF34Q969K3 372 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 VAT1Q99536 393 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 PPANQ9NQ55 473 aaKnown RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 WHRNQ9P202 907 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 BLVRAP53004 296 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 MAD2L1Q13257 205 aaPredicted RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 ITGADQ13349 1161 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 PDXDC2PQ6P474 469 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 LRRC31Q6UY01 552 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 XXYLT1Q8NBI6 393 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.26□□□□□ -1.73
USH2A-201ENST00000307340 TNNI1P19237 187 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 EFR3BQ9Y2G0 817 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 A0A1B0GTH6 734 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 DNAJA2O60884 412 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 GPC4O75487 556 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 OSBPP22059 807 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 MYL7Q01449 175 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 TIMM50Q3ZCQ8 353 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 EPM2AIP1Q7L775 607 aaPredicted RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 RMND5BQ96G75 393 aaPredicted RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 SLAIN2Q9P270 581 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 MTMR6Q9Y217 621 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 SHPRHQ149N8 1683 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 MYO18AQ92614 2054 aaKnown RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 LIN7AO14910 233 aaPredicted RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 PIK3CGP48736 1102 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 COPB1P53618 953 aaKnown RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 HIF1AQ16665 826 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 KIAA1755Q5JYT7 1200 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 C10orf62Q5T681 223 aaPredicted RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 RRAGAQ7L523 313 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 TPH2Q8IWU9 490 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 ACTRT1Q8TDG2 376 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 TMX1Q9H3N1 280 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 ADAM21Q9UKJ8 722 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 TRPC5OSA6NMA1 111 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 PFKFB3Q16875 520 aaPredicted RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 THEM5Q8N1Q8 247 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 ZNF560Q96MR9 790 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 TMX2Q9Y320 296 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 SALL1Q9NSC2 1324 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 SLC22A2O15244 555 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 RASSF9O75901 435 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 PNMA6AP0CW24 399 aaPredicted RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 CES1P23141 567 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 TUBA4AP68366 448 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 KLC1Q07866 573 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 ELF2Q15723 593 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 AARS2Q5JTZ9 985 aaKnown RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 C20orf194Q5TEA3 1177 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 BEST2Q8NFU1 509 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 INPP5DQ92835 1189 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 PIK3AP1Q6ZUJ8 805 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 GPBP1Q86WP2 473 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 METTL23Q86XA0 190 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 SCYL3Q8IZE3 742 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 PACSIN1Q9BY11 444 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 ZFATQ9P243 1243 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 DCDC2Q9UHG0 476 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 NSFL1CQ9UNZ2 370 aaKnown RBP4.26□□□□□ -1.73
USH2A-201ENST00000307340 PCDHB2Q9Y5E7 798 aa4.26□□□□□ -1.73
USH2A-201ENST00000307340 C15orf38-AP3S2A0A0A6YYH1 394 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 K7ERI5 159 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 MEFVO15553 781 aaPredicted RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 MCF2P10911 925 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 PPP4R4Q6NUP7 873 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 STRADAQ7RTN6 431 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 ARPINQ7Z6K5 226 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 PYROXD1Q8WU10 500 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 SLC39A8Q9C0K1 460 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 ANKFY1Q9P2R3 1169 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 SUCLA2Q9P2R7 463 aaPredicted RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 PARNO95453 639 aaKnown RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 HIRAP54198 1017 aaPredicted RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 SYMPKQ92797 1274 aaKnown RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 NBPF3Q9H094 633 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 EPN3Q9H201 632 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 PRPSAP2O60256 369 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 RPL3P39023 403 aaKnown RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 RAP1GAPP47736 663 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 RASIP1Q5U651 963 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 PCNX4Q63HM2 1172 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms