RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ZNF473Q8WTR7 871 aaKnown RBP13.4□□□□□ -0.26
USP38-201ENST00000307017 PBXIP1Q96AQ6 731 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 C20orf96Q9NUD7 363 aaPredicted RBP13.4□□□□□ -0.26
USP38-201ENST00000307017 HSPA6P17066 643 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 C2CD6Q53TS8 623 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 CCDC157Q569K6 752 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 AARS2Q5JTZ9 985 aaKnown RBP13.4□□□□□ -0.26
USP38-201ENST00000307017 BBS5Q8N3I7 341 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 SH3KBP1Q96B97 665 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 ATP11BQ9Y2G3 1177 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 SEC24CP53992 1094 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 MRPL28Q13084 256 aaKnown RBP13.4□□□□□ -0.26
USP38-201ENST00000307017 CCHCR1Q8TD31 782 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 IQCDQ96DY2 449 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 C6orf203Q9P0P8 240 aaPredicted RBP13.4□□□□□ -0.26
USP38-201ENST00000307017 NR3C1P04150 777 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 BPIFB4P59827 614 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 CCDC15Q0P6D6 951 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 RASGRF1Q13972 1273 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 ZNF568Q3ZCX4 644 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 SWSAP1Q6NVH7 229 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 EIF2AQ9BY44 585 aaKnown RBP13.4□□□□□ -0.26
USP38-201ENST00000307017 A2MP01023 1474 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 SASH1O94885 1247 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 HSPA8P11142 646 aaKnown RBP13.4□□□□□ -0.26
USP38-201ENST00000307017 AKR1B1P15121 316 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 CLEC10AQ8IUN9 316 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 SLC17A8Q8NDX2 589 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 TEKT4Q8WW24 435 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 TMEM161AQ9NX61 479 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 TTC26A0AVF1 554 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 CCNE1P24864 410 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 SMARCA1P28370 1054 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 PPP2R5BQ15173 497 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 VPS50Q96JG6 964 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 STK17AQ9UEE5 414 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 MAP3K15Q6ZN16 1313 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 A0A1W2PQ27 194 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 A0A1W2PQ64 194 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 A0A1W2PQD8 194 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 CLDN3O15551 220 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 ZFXP17010 805 aaPredicted RBP13.39□□□□□ -0.27
USP38-201ENST00000307017 KCNA3P22001 575 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 ETFBP38117 255 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 ROR1Q01973 937 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 ELMO2Q96JJ3 720 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 WDR47O94967 919 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 STAG2Q8N3U4 1231 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 TBC1D22AQ8WUA7 517 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 TDP2O95551 362 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 P3H1Q32P28 736 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 TRAF7Q6Q0C0 670 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 CLEC4FQ8N1N0 589 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 ATP6V0A1Q93050 837 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 TPST1O60507 370 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 GAP43P17677 238 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 MAP4P27816 1152 aaKnown RBP13.39□□□□□ -0.27
USP38-201ENST00000307017 ASPRV1Q53RT3 343 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 FAM102AQ5T9C2 384 aaPredicted RBP13.39□□□□□ -0.27
USP38-201ENST00000307017 ENAHQ8N8S7 591 aaPredicted RBP13.39□□□□□ -0.27
USP38-201ENST00000307017 GOLGA8QA0A0J9YX86 632 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 LOC100653049A0A140TA62 436 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 GOLGA8OA6NCC3 632 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 NBPF26B4DH59 902 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 GOLGA8NF8WBI6 632 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 KRT34O76011 436 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 BRD2P25440 801 aaKnown RBP13.39□□□□□ -0.27
USP38-201ENST00000307017 RFX3P48380 749 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 AMHR2Q16671 573 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 NBPF15Q8N660 670 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 RMDN1Q96DB5 314 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 BRIP1Q9BX63 1249 aa13.39□□□□□ -0.27
USP38-201ENST00000307017 INTS2Q9H0H0 1204 aaKnown RBP13.39□□□□□ -0.27
USP38-201ENST00000307017 DENND3A2RUS2 1198 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 PSAPP07602 524 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 GPC5P78333 572 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 MTMR1Q13613 665 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 ZBTB10Q96DT7 871 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 MKNK1Q9BUB5 465 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 RNF26Q9BY78 433 aaPredicted RBP13.38□□□□□ -0.27
USP38-201ENST00000307017 LIMA1Q9UHB6 759 aaKnown RBP13.38□□□□□ -0.27
USP38-201ENST00000307017 NCF1BA6NI72 391 aaPredicted RBP13.38□□□□□ -0.27
USP38-201ENST00000307017 NCF1CA8MVU1 366 aaPredicted RBP13.38□□□□□ -0.27
USP38-201ENST00000307017 PYGBP11216 843 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 NCF1P14598 390 aaPredicted RBP13.38□□□□□ -0.27
USP38-201ENST00000307017 GPC3P51654 580 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 CUL1Q13616 776 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 FAM196AQ6ZSG2 479 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 CHSY1Q86X52 802 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 ACAP3Q96P50 834 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 FAM49BQ9NUQ9 324 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 AIPL1Q9NZN9 384 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 TARSL2A2RTX5 802 aaKnown RBP13.38□□□□□ -0.27
USP38-201ENST00000307017 ZNF233A6NK53 670 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 GFAPP14136 432 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 CHRNA3P32297 505 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 SLC16A1P53985 500 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 KAT2BQ92831 832 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 TMEM206Q9H813 350 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 SP110Q9HB58 689 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms