RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 MTSS1LQ765P7 747 aa11.32□□□□□ -0.6
COL4A3-201ENST00000304990 TAS1R1Q7RTX1 841 aa11.32□□□□□ -0.6
COL4A3-201ENST00000304990 ZNF707Q96C28 371 aaPredicted RBP11.32□□□□□ -0.6
COL4A3-201ENST00000304990 TEKT3Q9BXF9 490 aa11.32□□□□□ -0.6
COL4A3-201ENST00000304990 PRKD2Q9BZL6 878 aa11.32□□□□□ -0.6
COL4A3-201ENST00000304990 EPC1Q9H2F5 836 aa11.32□□□□□ -0.6
COL4A3-201ENST00000304990 NAP1L2Q9ULW6 460 aaPredicted RBP11.32□□□□□ -0.6
COL4A3-201ENST00000304990 POLIQ9UNA4 740 aa11.32□□□□□ -0.6
COL4A3-201ENST00000304990 FARP1Q9Y4F1 1045 aaPredicted RBP11.32□□□□□ -0.6
COL4A3-201ENST00000304990 CACNA1IQ9P0X4 2223 aa11.32□□□□□ -0.6
COL4A3-201ENST00000304990 COL4A3Q01955 1670 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.31□□□□□ -0.6
COL4A3-201ENST00000304990 ITGA4P13612 1032 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 CD72P21854 359 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 SPEM2Q0P670 501 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 LPAL2Q16609 132 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 UGCGQ16739 394 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 LIN9Q5TKA1 542 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 PARM1Q6UWI2 310 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 KSR1Q8IVT5 923 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 FGF14Q92915 247 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 MAP4K1Q92918 833 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 JPH2Q9BR39 696 aaPredicted RBP11.31□□□□□ -0.6
COL4A3-201ENST00000304990 RPP25Q9BUL9 199 aaKnown RBP11.31□□□□□ -0.6
COL4A3-201ENST00000304990 PHF20Q9BVI0 1012 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 COLEC11Q9BWP8 271 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 OSBPL6Q9BZF3 934 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 RXFP1Q9HBX9 757 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 C6orf50Q9HD87 102 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 LTB4R2Q9NPC1 389 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 UBN1Q9NPG3 1134 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.31□□□□□ -0.6
COL4A3-201ENST00000304990 AGPAT5Q9NUQ2 364 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 CDH7Q9ULB5 785 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 MTF2Q9Y483 593 aaPredicted RBP11.31□□□□□ -0.6
COL4A3-201ENST00000304990 KMT2BQ9UMN6 2715 aaPredicted RBP11.31□□□□□ -0.6
COL4A3-201ENST00000304990 OTOGLQ3ZCN5 2332 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 DNAH14Q0VDD8 3507 aa11.31□□□□□ -0.6
COL4A3-201ENST00000304990 NCOR2Q9Y618 2525 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 DDX11L8A8MPP1 907 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 SGSM2O43147 1006 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 ZBTB43O43298 467 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 TGM5O43548 720 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 GSPT1P15170 499 aaKnown RBP11.3□□□□□ -0.6
COL4A3-201ENST00000304990 DSG1Q02413 1049 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 CREMQ03060 361 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 COL9A3Q14050 684 aaPredicted RBP11.3□□□□□ -0.6
COL4A3-201ENST00000304990 PPP2R5DQ14738 602 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 XKR3Q5GH77 459 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 LRCH2Q5VUJ6 765 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 RSPO2Q6UXX9 243 aaPredicted RBP11.3□□□□□ -0.6
COL4A3-201ENST00000304990 PRR23BQ6ZRT6 265 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 TPRG1Q6ZUI0 275 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 CENPQQ7L2Z9 268 aaPredicted RBP11.3□□□□□ -0.6
COL4A3-201ENST00000304990 MIER3Q7Z3K6 550 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 GRASPQ7Z6J2 395 aaPredicted RBP11.3□□□□□ -0.6
COL4A3-201ENST00000304990 REXO1Q8N1G1 1221 aaKnown RBP11.3□□□□□ -0.6
COL4A3-201ENST00000304990 ZBTB44Q8NCP5 570 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 CNNM3Q8NE01 707 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 NETO1Q8TDF5 533 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 CCDC12Q8WUD4 166 aaPredicted RBP11.3□□□□□ -0.6
COL4A3-201ENST00000304990 NELL2Q99435 816 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 SH2D3AQ9BRG2 576 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 MARCH5Q9NX47 278 aa11.3□□□□□ -0.6
COL4A3-201ENST00000304990 MRPS17Q9Y2R5 130 aaKnown RBP11.3□□□□□ -0.6
COL4A3-201ENST00000304990 TMEM150BA6NC51 233 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 GOLGA8AA7E2F4 631 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 GOLGA8BA8MQT2 603 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 LILRB5O75023 590 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 ZMYND10O75800 440 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 ERLIN2O94905 339 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 AFF1P51825 1210 aaKnown RBP11.29□□□□□ -0.6
COL4A3-201ENST00000304990 NRLP54845 237 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 TARBP2Q15633 366 aaKnown RBP11.29□□□□□ -0.6
COL4A3-201ENST00000304990 USP41Q3LFD5 358 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 PPM1LQ5SGD2 360 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 APOA5Q6Q788 366 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 MRPL10Q7Z7H8 261 aaKnown RBP11.29□□□□□ -0.6
COL4A3-201ENST00000304990 SGMS1Q86VZ5 419 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 COLGALT2Q8IYK4 626 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 B3GALT6Q96L58 329 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 KXD1Q9BQD3 176 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 DDX23Q9BUQ8 820 aaKnown RBP11.29□□□□□ -0.6
COL4A3-201ENST00000304990 APOL6Q9BWW8 343 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 NIFKQ9BYG3 293 aaKnown RBP11.29□□□□□ -0.6
COL4A3-201ENST00000304990 FAM126AQ9BYI3 521 aaPredicted RBP11.29□□□□□ -0.6
COL4A3-201ENST00000304990 UNC45AQ9H3U1 944 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 PARD6AQ9NPB6 346 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.29□□□□□ -0.6
COL4A3-201ENST00000304990 RALGAPA1Q6GYQ0 2036 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 CEP250Q9BV73 2442 aa11.29□□□□□ -0.6
COL4A3-201ENST00000304990 SLC30A4O14863 429 aa11.28□□□□□ -0.6
COL4A3-201ENST00000304990 SLC27A2O14975 620 aa11.28□□□□□ -0.6
COL4A3-201ENST00000304990 XYLBO75191 536 aa11.28□□□□□ -0.6
COL4A3-201ENST00000304990 C1RP00736 705 aa11.28□□□□□ -0.6
COL4A3-201ENST00000304990 SRGAP2CP0DJJ0 459 aa11.28□□□□□ -0.6
COL4A3-201ENST00000304990 RPL17P18621 184 aaKnown RBP11.28□□□□□ -0.6
COL4A3-201ENST00000304990 NCLP19338 710 aaKnown RBP11.28□□□□□ -0.6
COL4A3-201ENST00000304990 GNA11P29992 359 aa11.28□□□□□ -0.6
COL4A3-201ENST00000304990 MLH1P40692 756 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms