RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 FAM96AQ9H5X1 160 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 RBAKQ9NYW8 714 aaPredicted RBP14.81□□□□□ -0.04
PRKCB-201ENST00000303531 SNX12Q9UMY4 172 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 DHX34Q14147 1143 aaKnown RBP14.81□□□□□ -0.04
PRKCB-201ENST00000303531 HEATR6Q6AI08 1181 aaKnown RBP14.81□□□□□ -0.04
PRKCB-201ENST00000303531 BEST2Q8NFU1 509 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 SCG3Q8WXD2 468 aaKnown RBP14.81□□□□□ -0.04
PRKCB-201ENST00000303531 ARHGEF1Q92888 912 aaKnown RBP14.81□□□□□ -0.04
PRKCB-201ENST00000303531 NRBF2Q96F24 287 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 AGPAT1Q99943 283 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 DDX56Q9NY93 547 aaKnown RBP14.81□□□□□ -0.04
PRKCB-201ENST00000303531 GGPS1O95749 300 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 C12orf60Q5U649 245 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 ENOSF1Q7L5Y1 443 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 THEM5Q8N1Q8 247 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 EDEM3Q9BZQ6 932 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 ALKQ9UM73 1620 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 SMARCA1P28370 1054 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 CYFIP1Q7L576 1253 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 ARHGEF40Q8TER5 1519 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 PNPLA6Q8IY17 1366 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 NMT1P30419 496 aaKnown RBP14.81□□□□□ -0.04
PRKCB-201ENST00000303531 ARFIP2P53365 341 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 HAUS6Q7Z4H7 955 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 MRPL4Q9BYD3 311 aaKnown RBP14.81□□□□□ -0.04
PRKCB-201ENST00000303531 ECT2Q9H8V3 914 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 CROCC2H7BZ55 1655 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 EYA4O95677 639 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 FGFR4P22455 802 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 KRT17Q04695 432 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 DPYDQ12882 1025 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 TWF2Q6IBS0 349 aaKnown RBP14.81□□□□□ -0.04
PRKCB-201ENST00000303531 FRA10AC1Q70Z53 315 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 MARCH10Q8NA82 808 aaPredicted RBP14.81□□□□□ -0.04
PRKCB-201ENST00000303531 C2orf40Q9H1Z8 148 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 DRP2Q13474 957 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 ZBTB41Q5SVQ8 909 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 KCNV2Q8TDN2 545 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 ZBTB18Q99592 522 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 SUCLA2Q9P2R7 463 aaPredicted RBP14.8□□□□□ -0.04
PRKCB-201ENST00000303531 FAM8A1Q9UBU6 413 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 PDXKO00764 312 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 GUCY1A3Q02108 690 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 FOXD4Q12950 439 aaPredicted RBP14.8□□□□□ -0.04
PRKCB-201ENST00000303531 PDIA5Q14554 519 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 TRIM72Q6ZMU5 477 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 ATP11CQ8NB49 1132 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 EEF1DP29692 281 aaKnown RBP14.8□□□□□ -0.04
PRKCB-201ENST00000303531 BCAR1P56945 870 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 TMEM259Q4ZIN3 620 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 SLC13A1Q9BZW2 595 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 CHGBP05060 677 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 CDR2Q01850 454 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 DEUP1Q05D60 604 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 FAM102AQ5T9C2 384 aaPredicted RBP14.8□□□□□ -0.04
PRKCB-201ENST00000303531 ANGPTL8Q6UXH0 198 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 CCNYL1Q8N7R7 359 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 PRPF38AQ8NAV1 312 aaKnown RBP14.8□□□□□ -0.04
PRKCB-201ENST00000303531 NSUN4Q96CB9 384 aaKnown RBP14.8□□□□□ -0.04
PRKCB-201ENST00000303531 MS4A14Q96JA4 679 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 CCSER1Q9C0I3 900 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 DONSONQ9NYP3 566 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 CYP26A1O43174 497 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 DIAPH2O60879 1101 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 ELF1P32519 619 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 SPP2Q13103 211 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 RGS9BPQ6ZS82 235 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 IGDCC4Q8TDY8 1250 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 NCLNQ969V3 563 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 BTBD6Q96KE9 485 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 ETNK1Q9HBU6 452 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 STOML1Q9UBI4 398 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 AP1B1Q10567 949 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 FAM217BQ9NTX9 383 aaPredicted RBP14.8□□□□□ -0.04
PRKCB-201ENST00000303531 RGL1Q9NZL6 768 aa14.8□□□□□ -0.04
PRKCB-201ENST00000303531 AGO2Q9UKV8 859 aaKnown RBP14.8□□□□□ -0.04
PRKCB-201ENST00000303531 SCN4BQ8IWT1 228 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 ADSSL1Q8N142 457 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 PARVAQ9NVD7 372 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 TRIM33Q9UPN9 1127 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 SNX2O60749 519 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 TMED1Q13445 227 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 SMAD1Q15797 465 aaKnown RBP14.79□□□□□ -0.04
PRKCB-201ENST00000303531 RASSF3Q86WH2 238 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 STAP1Q9ULZ2 295 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 ATXN8OSP0DMR3 200 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 EPHA7Q15375 998 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 IFT43Q96FT9 208 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 SPHKAPQ2M3C7 1700 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 L3MBTL1Q9Y468 752 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 ACTN3Q08043 901 aaPredicted RBP14.79□□□□□ -0.04
PRKCB-201ENST00000303531 C1orf228Q6PIY5 440 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 NUDCD3Q8IVD9 361 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 TSC22D3Q99576 134 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 SRGNP10124 158 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 ARSEP51690 589 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 POU5F1BQ06416 359 aa14.79□□□□□ -0.04
PRKCB-201ENST00000303531 LMBRD2Q68DH5 695 aaPredicted RBP14.79□□□□□ -0.04
PRKCB-201ENST00000303531 GCOM2Q9BZD3 368 aaPredicted RBP14.79□□□□□ -0.04
PRKCB-201ENST00000303531 TRPV6Q9H1D0 765 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms