RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 CCDC92Q53HC0 331 aaPredicted RBP13.1□□□□□ -0.31
ABCA3-201ENST00000301732 FSCBQ5H9T9 825 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 C6orf10Q5SRN2 563 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 ATP11CQ8NB49 1132 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 ZNF341Q9BYN7 854 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 PCMTD2Q9NV79 361 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 GAP43P17677 238 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 GPC5P78333 572 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 SYCP2Q9BX26 1530 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 EPC2Q52LR7 807 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 DIS3LQ8TF46 1054 aaKnown RBP13.1□□□□□ -0.31
ABCA3-201ENST00000301732 YIPF2Q9BWQ6 316 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 ZFYVE9O95405 1425 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 ZNF233A6NK53 670 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 PPEF1O14829 653 aaPredicted RBP13.1□□□□□ -0.31
ABCA3-201ENST00000301732 TARSP26639 723 aaKnown RBP13.1□□□□□ -0.31
ABCA3-201ENST00000301732 GUCY1A2P33402 732 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 MAPK10P53779 464 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 COASYQ13057 564 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 ZNF699Q32M78 642 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.1□□□□□ -0.31
ABCA3-201ENST00000301732 BHMTQ93088 406 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 CHCHD3Q9NX63 227 aaKnown RBP13.1□□□□□ -0.31
ABCA3-201ENST00000301732 CDV3Q9UKY7 258 aaKnown RBP13.1□□□□□ -0.31
ABCA3-201ENST00000301732 CYP26A1O43174 497 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 FAM83BQ5T0W9 1011 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 ENAHQ8N8S7 591 aaPredicted RBP13.09□□□□□ -0.31
ABCA3-201ENST00000301732 TEKT4Q8WW24 435 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 TMEM206Q9H813 350 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 PTPRHQ9HD43 1115 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 PLEKHG3A1L390 1219 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 FAM205CA6NFA0 338 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 CLDN3O15551 220 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 CAND2O75155 1236 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 CDK8P49336 464 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 SMTNL2Q2TAL5 461 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 PLD3Q8IV08 490 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 STAG2Q8N3U4 1231 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 SH3GL3Q99963 347 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 UHRF1BP1LA0JNW5 1464 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 USP17L10C9JJH3 530 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 NFIBO00712 420 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 SASH1O94885 1247 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 GRK2P25098 689 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 RASGRF1Q13972 1273 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 DNAAF5Q86Y56 855 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 SH3KBP1Q96B97 665 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 PGBD4Q96DM1 585 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 TAF1DQ9H5J8 278 aaPredicted RBP13.09□□□□□ -0.31
ABCA3-201ENST00000301732 CHMP2BQ9UQN3 213 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 LMTK3Q96Q04 1460 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 TRIM37O94972 964 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 PYGBP11216 843 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 GNA15P30679 374 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 HIC1Q14526 733 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 ERP27Q96DN0 273 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 VPS39Q96JC1 886 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 UNKQ9C0B0 810 aaKnown RBP13.09□□□□□ -0.31
ABCA3-201ENST00000301732 KCNN4O15554 427 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 KCNJ1P48048 391 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 CENPAP49450 140 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 TMCO5AQ8N6Q1 288 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 SLC17A8Q8NDX2 589 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 FAM217BQ9NTX9 383 aaPredicted RBP13.09□□□□□ -0.31
ABCA3-201ENST00000301732 USP21Q9UK80 565 aa13.09□□□□□ -0.31
ABCA3-201ENST00000301732 SPATA21Q7Z572 469 aa13.08□□□□□ -0.31
ABCA3-201ENST00000301732 ADGRG1Q9Y653 693 aa13.08□□□□□ -0.31
ABCA3-201ENST00000301732 TRIM25Q14258 630 aaKnown RBP13.08□□□□□ -0.32
ABCA3-201ENST00000301732 FAM102AQ5T9C2 384 aaPredicted RBP13.08□□□□□ -0.32
ABCA3-201ENST00000301732 TTC8Q8TAM2 541 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 SLC9A2Q9UBY0 812 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 KPNA2P52292 529 aaKnown RBP13.08□□□□□ -0.32
ABCA3-201ENST00000301732 ASPRV1Q53RT3 343 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 PLEKHM3Q6ZWE6 761 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 RBM46Q8TBY0 533 aaKnown RBP13.08□□□□□ -0.32
ABCA3-201ENST00000301732 SYNDIG1Q9H7V2 258 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 AGPAT5Q9NUQ2 364 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 PCDHA6Q9UN73 950 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 PCDHA8Q9Y5H6 950 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 GH2P01242 217 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 KRT4P19013 534 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 AVPR1AP37288 418 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 P3H1Q32P28 736 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 ZNF667Q5HYK9 610 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 RMDN1Q96DB5 314 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 CCT8L2Q96SF2 557 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 PODXLO00592 558 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 TDP2O95551 362 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 APRTP07741 180 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 MCAMP43121 646 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 USP14P54578 494 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 UBE3CQ15386 1083 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 TRIP10Q15642 601 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 C2CD6Q53TS8 623 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 CATSPER4Q7RTX7 472 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 MKNK1Q9BUB5 465 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 ZSCAN32Q9NX65 697 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 SETD1BQ9UPS6 1966 aaKnown RBP13.08□□□□□ -0.32
ABCA3-201ENST00000301732 DENND3A2RUS2 1198 aa13.08□□□□□ -0.32
ABCA3-201ENST00000301732 TMEM247A6NEH6 219 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms