RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 TMEM191BP0C7N4 346 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 ZBED8Q8IZ13 594 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 NLGN1Q8N2Q7 840 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 LRRC15Q8TF66 581 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 YIPF3Q9GZM5 350 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 TMEM206Q9H813 350 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 MON2Q7Z3U7 1717 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 TROVE2P10155 538 aaKnown RBP eCLIP14.23□□□□□ -0.13
CASC4-201ENST00000299957 GBP1P32455 592 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 PPP4CP60510 307 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 PRUNE1Q86TP1 453 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 RFX6Q8HWS3 928 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 DAGLBQ8NCG7 672 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 MAML1Q92585 1016 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 HSPH1Q92598 858 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 ACTR5Q9H9F9 607 aaPredicted RBP14.23□□□□□ -0.13
CASC4-201ENST00000299957 ZNF277Q9NRM2 450 aaPredicted RBP14.23□□□□□ -0.13
CASC4-201ENST00000299957 AGPAT3Q9NRZ7 376 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 HSPBP1Q9NZL4 362 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 SHBGP04278 402 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 ZNF844Q08AG5 666 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 EDRF1Q3B7T1 1238 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 FIGNQ5HY92 759 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 DNAJC24Q6P3W2 148 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 EPM2AIP1Q7L775 607 aaPredicted RBP14.22□□□□□ -0.13
CASC4-201ENST00000299957 C7orf31Q8N865 590 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 IWS1Q96ST2 819 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 APOL6Q9BWW8 343 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 SEPT10Q9P0V9 454 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 BCL9O00512 1426 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 K7ERI5 159 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 GJB6O95452 261 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 SPP2Q13103 211 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 SLC35G1Q2M3R5 365 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 CFAP157Q5JU67 520 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 ARHGEF18Q6ZSZ5 1173 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 GRK7Q8WTQ7 553 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 MYH10P35580 1976 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 CCDC195A0A1B0GUA6 201 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 PODXLO00592 558 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 TLR3O15455 904 aaKnown RBP14.22□□□□□ -0.13
CASC4-201ENST00000299957 STAM2O75886 525 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 ARL1P40616 181 aaPredicted RBP14.22□□□□□ -0.13
CASC4-201ENST00000299957 DNAJC3Q13217 504 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 SMTNL2Q2TAL5 461 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 CBWD6Q4V339 395 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 CBWD3Q5JTY5 395 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 CBWD5Q5RIA9 395 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 SESTD1Q86VW0 696 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 LMNTD2Q8IXW0 634 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 SLC17A8Q8NDX2 589 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 DTX3LQ8TDB6 740 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 NLRP4Q96MN2 994 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 RIOX1Q9H6W3 641 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 TRPC6Q9Y210 931 aa14.22□□□□□ -0.13
CASC4-201ENST00000299957 OPLAHO14841 1288 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 KRT10P13645 584 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 IZUMO3Q5VZ72 239 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 CROCCP2Q86T23 111 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 SULF1Q8IWU6 871 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 SYT2Q8N9I0 419 aaPredicted RBP14.21□□□□□ -0.13
CASC4-201ENST00000299957 TMEM143Q96AN5 459 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 DNAJC19Q96DA6 116 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 DDX20Q9UHI6 824 aaKnown RBP14.21□□□□□ -0.13
CASC4-201ENST00000299957 COL5A2P05997 1499 aaPredicted RBP14.21□□□□□ -0.13
CASC4-201ENST00000299957 RIMBP3CA6NJZ7 1639 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 RIMBP3BA6NNM3 1639 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 RIMBP3Q9UFD9 1639 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 QARSP47897 775 aaKnown RBP14.21□□□□□ -0.13
CASC4-201ENST00000299957 KIF22Q14807 665 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 KDM7AQ6ZMT4 941 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 SLC47A2Q86VL8 602 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 ZC3H18Q86VM9 953 aaKnown RBP14.21□□□□□ -0.13
CASC4-201ENST00000299957 CCDC33Q8N5R6 958 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 PYROXD1Q8WU10 500 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 DCAF4Q8WV16 495 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 SLC35C1Q96A29 364 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 CFAP36Q96G28 342 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 TMEM39BQ9GZU3 492 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 NR2E1Q9Y466 385 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 HEY1Q9Y5J3 304 aa14.21□□□□□ -0.13
CASC4-201ENST00000299957 CHRNA3P32297 505 aa14.21□□□□□ -0.14
CASC4-201ENST00000299957 BYSLQ13895 437 aaKnown RBP14.21□□□□□ -0.14
CASC4-201ENST00000299957 PPP6R3Q5H9R7 873 aaPredicted RBP14.21□□□□□ -0.14
CASC4-201ENST00000299957 CYB5D1Q6P9G0 228 aa14.21□□□□□ -0.14
CASC4-201ENST00000299957 NIM1KQ8IY84 436 aa14.21□□□□□ -0.14
CASC4-201ENST00000299957 PDCD7Q8N8D1 485 aaKnown RBP14.21□□□□□ -0.14
CASC4-201ENST00000299957 SLC7A3Q8WY07 619 aa14.21□□□□□ -0.14
CASC4-201ENST00000299957 CXorf56Q9H5V9 222 aa14.21□□□□□ -0.14
CASC4-201ENST00000299957 ZNF408Q9H9D4 720 aa14.21□□□□□ -0.14
CASC4-201ENST00000299957 TMBIM4Q9HC24 238 aa14.21□□□□□ -0.14
CASC4-201ENST00000299957 CFAP69A5D8W1 941 aa14.2□□□□□ -0.14
CASC4-201ENST00000299957 INHBAP08476 426 aa14.2□□□□□ -0.14
CASC4-201ENST00000299957 AARSP49588 968 aaKnown RBP eCLIP14.2□□□□□ -0.14
CASC4-201ENST00000299957 OVGP1Q12889 678 aa14.2□□□□□ -0.14
CASC4-201ENST00000299957 MTMR9Q96QG7 549 aa14.2□□□□□ -0.14
CASC4-201ENST00000299957 MARCOQ9UEW3 520 aaPredicted RBP14.2□□□□□ -0.14
CASC4-201ENST00000299957 STK24Q9Y6E0 443 aa14.2□□□□□ -0.14
CASC4-201ENST00000299957 CAMTA1Q9Y6Y1 1673 aa14.2□□□□□ -0.14
CASC4-201ENST00000299957 MIF4GDA9UHW6 222 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms