RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 NXPE3Q969Y0 559 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 NLRP4Q96MN2 994 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 RSAD1Q9HA92 442 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 UBN1Q9NPG3 1134 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 WNT16Q9UBV4 365 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 FAN1Q9Y2M0 1017 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 PCDHB2Q9Y5E7 798 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 WDR81Q562E7 1941 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 MEIS3P2A8K0S8 358 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 STBD1O95210 358 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 SOD2P04179 222 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 URODP06132 367 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 ADH1AP07327 375 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 NLRP5P59047 1200 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 PSMC5P62195 406 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 PCBP1Q15365 356 aaKnown RBP eCLIP11.79□□□□□ -0.52
RFC4-201ENST00000296273 LONRF3Q496Y0 759 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 AGMOQ6ZNB7 445 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 SRGAP1Q7Z6B7 1085 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 MRPL10Q7Z7H8 261 aaKnown RBP11.79□□□□□ -0.52
RFC4-201ENST00000296273 ZNF280BQ86YH2 543 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 SIX5Q8N196 739 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 DTWD2Q8NBA8 298 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 SLC7A3Q8WY07 619 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 VN1R3Q9BXE9 311 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 SLC26A6Q9BXS9 759 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 IFT122Q9HBG6 1241 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 VPS54Q9P1Q0 977 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 MTMR6Q9Y217 621 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 COL4A3BPQ9Y5P4 624 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 MYO10Q9HD67 2058 aa11.78□□□□□ -0.52
RFC4-201ENST00000296273 CACNA1HO95180 2353 aa11.78□□□□□ -0.52
RFC4-201ENST00000296273 NRP1O14786 923 aa11.78□□□□□ -0.52
RFC4-201ENST00000296273 PI15O43692 258 aa11.78□□□□□ -0.52
RFC4-201ENST00000296273 DDHD2O94830 711 aa11.78□□□□□ -0.52
RFC4-201ENST00000296273 LARGE1O95461 756 aa11.78□□□□□ -0.52
RFC4-201ENST00000296273 C1RP00736 705 aa11.78□□□□□ -0.52
RFC4-201ENST00000296273 UBE2HP62256 183 aa11.78□□□□□ -0.52
RFC4-201ENST00000296273 ANO5Q75V66 913 aa11.78□□□□□ -0.52
RFC4-201ENST00000296273 TRIM22Q8IYM9 498 aa11.78□□□□□ -0.52
RFC4-201ENST00000296273 FAM177A1Q8N128 213 aaPredicted RBP11.78□□□□□ -0.52
RFC4-201ENST00000296273 FAM184AQ8NB25 1140 aa11.78□□□□□ -0.52
RFC4-201ENST00000296273 HDAC7Q8WUI4 952 aa11.78□□□□□ -0.52
RFC4-201ENST00000296273 RPS6KC1Q96S38 1066 aa11.78□□□□□ -0.52
RFC4-201ENST00000296273 SH2D3AQ9BRG2 576 aa11.78□□□□□ -0.52
RFC4-201ENST00000296273 SCAND2PQ9GZW5 306 aaPredicted RBP11.78□□□□□ -0.52
RFC4-201ENST00000296273 WDR6Q9NNW5 1121 aaKnown RBP11.78□□□□□ -0.52
RFC4-201ENST00000296273 MAN1C1Q9NR34 630 aa11.78□□□□□ -0.52
RFC4-201ENST00000296273 PCDHA4Q9UN74 947 aa11.78□□□□□ -0.52
RFC4-201ENST00000296273 ZFHX2Q9C0A1 2572 aaPredicted RBP11.77□□□□□ -0.53
RFC4-201ENST00000296273 CCDC195A0A1B0GUA6 201 aa11.77□□□□□ -0.53
RFC4-201ENST00000296273 TMEM150BA6NC51 233 aa11.77□□□□□ -0.53
RFC4-201ENST00000296273 ASAP2O43150 1006 aa11.77□□□□□ -0.53
RFC4-201ENST00000296273 GAS2O43903 313 aaKnown RBP11.77□□□□□ -0.53
RFC4-201ENST00000296273 NR1I2O75469 434 aa11.77□□□□□ -0.53
RFC4-201ENST00000296273 CDKL5O76039 1030 aa11.77□□□□□ -0.53
RFC4-201ENST00000296273 GLUD1P00367 558 aa11.77□□□□□ -0.53
RFC4-201ENST00000296273 SSBP05455 408 aaKnown RBP eCLIP11.77□□□□□ -0.53
RFC4-201ENST00000296273 RFX1P22670 979 aa11.77□□□□□ -0.53
RFC4-201ENST00000296273 GBP2P32456 591 aaPredicted RBP11.77□□□□□ -0.53
RFC4-201ENST00000296273 QARSP47897 775 aaKnown RBP11.77□□□□□ -0.53
RFC4-201ENST00000296273 KRT85P78386 507 aa11.77□□□□□ -0.53
RFC4-201ENST00000296273 GALNT17Q6IS24 598 aa11.77□□□□□ -0.53
RFC4-201ENST00000296273 CPLX2Q6PUV4 134 aaKnown RBP11.77□□□□□ -0.53
RFC4-201ENST00000296273 KSR1Q8IVT5 923 aa11.77□□□□□ -0.53
RFC4-201ENST00000296273 NECAB1Q8N987 351 aa11.77□□□□□ -0.53
RFC4-201ENST00000296273 ETNPPLQ8TBG4 499 aa11.77□□□□□ -0.53
RFC4-201ENST00000296273 PSPC1Q8WXF1 523 aaKnown RBP11.77□□□□□ -0.53
RFC4-201ENST00000296273 ANP32BQ92688 251 aaKnown RBP11.77□□□□□ -0.53
RFC4-201ENST00000296273 GJA10Q969M2 543 aa11.77□□□□□ -0.53
RFC4-201ENST00000296273 MBOAT7Q96N66 472 aa11.77□□□□□ -0.53
RFC4-201ENST00000296273 HERC2P3Q9BVR0 1158 aa11.77□□□□□ -0.53
RFC4-201ENST00000296273 EPS15L1Q9UBC2 864 aa11.77□□□□□ -0.53
RFC4-201ENST00000296273 CFAP45Q9UL16 551 aa11.77□□□□□ -0.53
RFC4-201ENST00000296273 CLUHO75153 1309 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 STK25O00506 426 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 INPPL1O15357 1258 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 B4GALT3O60512 393 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 PAPLNO95428 1278 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 TDP2O95551 362 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 LMNAP02545 664 aaKnown RBP11.76□□□□□ -0.53
RFC4-201ENST00000296273 SRFP11831 508 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 AXLP30530 894 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 RFC5P40937 340 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 PPP2R5CQ13362 524 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 ZC3H14Q6PJT7 736 aaKnown RBP11.76□□□□□ -0.53
RFC4-201ENST00000296273 GPR65Q8IYL9 337 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 RNF168Q8IYW5 571 aaPredicted RBP11.76□□□□□ -0.53
RFC4-201ENST00000296273 BLIDQ8IZY5 108 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 DAGLBQ8NCG7 672 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 TCP11Q8WWU5 503 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 CEP170P1Q96L14 293 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 GZF1Q9H116 711 aaPredicted RBP11.76□□□□□ -0.53
RFC4-201ENST00000296273 PLEKHA4Q9H4M7 779 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 DHX33Q9H6R0 707 aaKnown RBP11.76□□□□□ -0.53
RFC4-201ENST00000296273 GRPEL1Q9HAV7 217 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 RXFP1Q9HBX9 757 aa11.76□□□□□ -0.53
RFC4-201ENST00000296273 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.76□□□□□ -0.53
RFC4-201ENST00000296273 DMDP11532 3685 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 H3BQV1 296 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms