RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 TTI1O43156 1089 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 FGGP02679 453 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 CCND2P30279 289 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 EPHB4P54760 987 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 ACTR2P61160 394 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 KRT76Q01546 638 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 ZBTB41Q5SVQ8 909 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 CTNNBL1Q8WYA6 563 aaPredicted RBP12.74□□□□□ -0.37
RHO-201ENST00000296271 RFFLQ8WZ73 363 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 HES6Q96HZ4 224 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 ZBTB45Q96K62 511 aaPredicted RBP12.74□□□□□ -0.37
RHO-201ENST00000296271 TRIM51Q9BSJ1 452 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 MED4Q9NPJ6 270 aa12.74□□□□□ -0.37
RHO-201ENST00000296271 SSC5DA1L4H1 1573 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 SPDYE16A6NNV3 312 aaPredicted RBP12.73□□□□□ -0.37
RHO-201ENST00000296271 EDN1P05305 212 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 LMNB1P20700 586 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 JAK3P52333 1124 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 PRKCEQ02156 737 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 HLTFQ14527 1009 aaKnown RBP eCLIP12.73□□□□□ -0.37
RHO-201ENST00000296271 ZSCAN26Q16670 478 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 SEPT14Q6ZU15 432 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 IFT20Q8IY31 132 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 EPS8L1Q8TE68 723 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 PARD3BQ8TEW8 1205 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 POMGNT1Q8WZA1 660 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 KLRG1Q96E93 195 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 FAM213AQ9BRX8 229 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 DPH5Q9H2P9 285 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 ZNF112Q9UJU3 913 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 ZNF233A6NK53 670 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 ANKRD65E5RJM6 399 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 PGRMC1O00264 195 aaKnown RBP12.73□□□□□ -0.37
RHO-201ENST00000296271 DAPK3O43293 454 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 TMEM253P0C7T8 217 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 RPS12P25398 132 aaKnown RBP12.73□□□□□ -0.37
RHO-201ENST00000296271 DMP1Q13316 513 aaPredicted RBP12.73□□□□□ -0.37
RHO-201ENST00000296271 ZDHHC14Q8IZN3 488 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 AFAP1L1Q8TED9 768 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 ZNF516Q92618 1163 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.73□□□□□ -0.37
RHO-201ENST00000296271 HAPLN2Q9GZV7 340 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 CTTNBP2NLQ9P2B4 639 aa12.73□□□□□ -0.37
RHO-201ENST00000296271 DOCK1Q14185 1865 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 HNRNPDLO14979 420 aaKnown RBP12.72□□□□□ -0.37
RHO-201ENST00000296271 MAPTP10636 758 aaKnown RBP12.72□□□□□ -0.37
RHO-201ENST00000296271 ACOT2P49753 483 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 DAB2IPQ5VWQ8 1189 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 SPOPLQ6IQ16 392 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 CATSPERGQ6ZRH7 1159 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 MOB2Q70IA6 237 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 MAP4K3Q8IVH8 894 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 ACTRT1Q8TDG2 376 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 NSUN6Q8TEA1 469 aaKnown RBP12.72□□□□□ -0.37
RHO-201ENST00000296271 GLG1Q92896 1179 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 ZNF668Q96K58 619 aaPredicted RBP12.72□□□□□ -0.37
RHO-201ENST00000296271 TRIM7Q9C029 511 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 ACBD3Q9H3P7 528 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 JPH1Q9HDC5 661 aaPredicted RBP12.72□□□□□ -0.37
RHO-201ENST00000296271 SUCLA2Q9P2R7 463 aaPredicted RBP12.72□□□□□ -0.37
RHO-201ENST00000296271 NOCTQ9UK39 431 aaKnown RBP12.72□□□□□ -0.37
RHO-201ENST00000296271 AMFRQ9UKV5 643 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 PHIPQ8WWQ0 1821 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 LOXHD1Q8IVV2 1947 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 ZNFX1Q9P2E3 1918 aaKnown RBP12.72□□□□□ -0.37
RHO-201ENST00000296271 NCANO14594 1321 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 PTPRJQ12913 1337 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 TCRBV7S2A1N4TA0A589 114 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 TTLL13PA6NNM8 815 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 MESDQ14696 234 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 LRRC31Q6UY01 552 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 SV2AQ7L0J3 742 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 TEX2Q8IWB9 1127 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 HELQQ8TDG4 1101 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 POLR3FQ9H1D9 316 aaPredicted RBP12.72□□□□□ -0.37
RHO-201ENST00000296271 RNF14Q9UBS8 474 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 SLC9A2Q9UBY0 812 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 LCMT1Q9UIC8 334 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 ADAMTS5Q9UNA0 930 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 ALG6Q9Y672 507 aa12.72□□□□□ -0.37
RHO-201ENST00000296271 LCTP09848 1927 aa12.71□□□□□ -0.37
RHO-201ENST00000296271 A0A0A6YYK5 440 aaPredicted RBP12.71□□□□□ -0.37
RHO-201ENST00000296271 GOLGA6CA6NDK9 693 aa12.71□□□□□ -0.37
RHO-201ENST00000296271 CFHP08603 1231 aa12.71□□□□□ -0.37
RHO-201ENST00000296271 GOLGA6DP0CG33 693 aa12.71□□□□□ -0.37
RHO-201ENST00000296271 SFNP31947 248 aa12.71□□□□□ -0.37
RHO-201ENST00000296271 FMO1Q01740 532 aa12.71□□□□□ -0.37
RHO-201ENST00000296271 DRP2Q13474 957 aa12.71□□□□□ -0.37
RHO-201ENST00000296271 DCAF15Q66K64 600 aa12.71□□□□□ -0.37
RHO-201ENST00000296271 EMBQ6PCB8 327 aa12.71□□□□□ -0.37
RHO-201ENST00000296271 C12orf56Q8IXR9 622 aa12.71□□□□□ -0.37
RHO-201ENST00000296271 ZBTB10Q96DT7 871 aa12.71□□□□□ -0.37
RHO-201ENST00000296271 BICD1Q96G01 975 aa12.71□□□□□ -0.37
RHO-201ENST00000296271 PBKQ96KB5 322 aa12.71□□□□□ -0.37
RHO-201ENST00000296271 CYP26B1Q9NR63 512 aa12.71□□□□□ -0.37
RHO-201ENST00000296271 ANKEF1Q9NU02 776 aa12.71□□□□□ -0.37
RHO-201ENST00000296271 GOLGA6AQ9NYA3 693 aa12.71□□□□□ -0.37
RHO-201ENST00000296271 ATP1A2P50993 1020 aa12.71□□□□□ -0.38
RHO-201ENST00000296271 SMTNP53814 917 aa12.71□□□□□ -0.38
RHO-201ENST00000296271 TNNC1P63316 161 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms