RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 GABPB1Q06547 395 aaPredicted RBP10.04□□□□□ -0.8
CLRN1-201ENST00000295911 ENOX2Q16206 610 aaKnown RBP10.04□□□□□ -0.8
CLRN1-201ENST00000295911 CFAP221Q4G0U5 840 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 CBWD6Q4V339 395 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 XKR3Q5GH77 459 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 CBWD3Q5JTY5 395 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 CBWD5Q5RIA9 395 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 PLA2G4FQ68DD2 849 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 H2AFVQ71UI9 128 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 EMSYQ7Z589 1322 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 MAP4K3Q8IVH8 894 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 ANKRD13CQ8N6S4 541 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 RDH13Q8NBN7 331 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 NOA1Q8NC60 698 aaKnown RBP10.04□□□□□ -0.8
CLRN1-201ENST00000295911 TMEM161BQ8NDZ6 487 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 KCNN1Q92952 543 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 PCIF1Q9H4Z3 704 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 ATP6V0A4Q9HBG4 840 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 PDLIM7Q9NR12 457 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 SALL4Q9UJQ4 1053 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 NENFQ9UMX5 172 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 FZD1Q9UP38 647 aa10.04□□□□□ -0.8
CLRN1-201ENST00000295911 IGSF9BQ9UPX0 1349 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 DENND3A2RUS2 1198 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 KIAA0391O15091 583 aaKnown RBP10.03□□□□□ -0.8
CLRN1-201ENST00000295911 ZNF185O15231 689 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 BUB1O43683 1085 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 ZNF862O60290 1169 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 PALMO75781 387 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 TBC1D8O95759 1140 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 TRIM49P0CI25 452 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 TRIM49CP0CI26 452 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 TGFB3P10600 412 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 TNFAIP3P21580 790 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 GARTP22102 1010 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 CNGA1P29973 690 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 PRKG1Q13976 671 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 KIF22Q14807 665 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 GLE1Q53GS7 698 aaKnown RBP10.03□□□□□ -0.8
CLRN1-201ENST00000295911 BRDTQ58F21 947 aaPredicted RBP10.03□□□□□ -0.8
CLRN1-201ENST00000295911 BEND6Q5SZJ8 279 aaPredicted RBP10.03□□□□□ -0.8
CLRN1-201ENST00000295911 MEI1Q5TIA1 1274 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 ERO1BQ86YB8 467 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 SYCE1Q8N0S2 351 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 SLC30A5Q8TAD4 765 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 LMO3Q8TAP4 145 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 UBE2Q2Q8WVN8 375 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 TAF4BQ92750 862 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 FAM81BQ96LP2 452 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 PNKPQ96T60 521 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 CBWD1Q9BRT8 395 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 TLR10Q9BXR5 811 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 FUT8Q9BYC5 575 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 ACBD3Q9H3P7 528 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 KIAA1586Q9HCI6 787 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 GPRC5CQ9NQ84 441 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 CYP26B1Q9NR63 512 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 PPME1Q9Y570 386 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 LRRC37A2A6NM11 1700 aa10.03□□□□□ -0.8
CLRN1-201ENST00000295911 A0A0G2JLL6 359 aaPredicted RBP10.02□□□□□ -0.81
CLRN1-201ENST00000295911 TMEM150BA6NC51 233 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 MAP2K7O14733 419 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 TRIM66O15016 1216 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 DDNO94850 711 aaPredicted RBP10.02□□□□□ -0.81
CLRN1-201ENST00000295911 SEC31AO94979 1220 aaKnown RBP10.02□□□□□ -0.81
CLRN1-201ENST00000295911 SLC25A27O95847 323 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 TFRCP02786 760 aaKnown RBP10.02□□□□□ -0.81
CLRN1-201ENST00000295911 NOP2P46087 812 aaKnown RBP10.02□□□□□ -0.81
CLRN1-201ENST00000295911 ALDH5A1P51649 535 aaPredicted RBP10.02□□□□□ -0.81
CLRN1-201ENST00000295911 IRX3P78415 501 aaPredicted RBP10.02□□□□□ -0.81
CLRN1-201ENST00000295911 PRKCEQ02156 737 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 NEDD9Q14511 834 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 SNRNP35Q16560 246 aaKnown RBP10.02□□□□□ -0.81
CLRN1-201ENST00000295911 EPC2Q52LR7 807 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 SWT1Q5T5J6 900 aaKnown RBP10.02□□□□□ -0.81
CLRN1-201ENST00000295911 NFRKBQ6P4R8 1299 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 GJB7Q6PEY0 223 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 KCNV1Q6PIU1 500 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 GADL1Q6ZQY3 521 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 PRRT2Q7Z6L0 340 aaPredicted RBP10.02□□□□□ -0.81
CLRN1-201ENST00000295911 ANKRD13AQ8IZ07 590 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 SPATA4Q8NEY3 305 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 PBKQ96KB5 322 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 FBXL18Q96ME1 805 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 SELENOOQ9BVL4 669 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 NIFKQ9BYG3 293 aaKnown RBP10.02□□□□□ -0.81
CLRN1-201ENST00000295911 SPATC1LQ9H0A9 340 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 ZNF302Q9NR11 478 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 NRBP2Q9NSY0 501 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 AJAP1Q9UKB5 411 aaPredicted RBP10.02□□□□□ -0.81
CLRN1-201ENST00000295911 L1RE1Q9UN81 338 aa10.02□□□□□ -0.81
CLRN1-201ENST00000295911 MAFBQ9Y5Q3 323 aaPredicted RBP10.02□□□□□ -0.81
CLRN1-201ENST00000295911 PDE2AO00408 941 aaPredicted RBP10.01□□□□□ -0.81
CLRN1-201ENST00000295911 DDX3XO00571 662 aaKnown RBP eCLIP10.01□□□□□ -0.81
CLRN1-201ENST00000295911 IRF6O14896 467 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 RNF40O75150 1001 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 OATP04181 439 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 TMEM253P0C7T8 217 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 RFC5P40937 340 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 PLA2G4AP47712 749 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms