RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 NOX5Q96PH1 765 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 SMARCAD1Q9H4L7 1026 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 HSPBP1Q9NZL4 362 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 ADAMTS1Q9UHI8 967 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 IVNS1ABPQ9Y6Y0 642 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 DENND3A2RUS2 1198 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 ANKRD63C9JTQ0 380 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 P4HA2O15460 535 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 GH1P01241 217 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 TRIM49P0CI25 452 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 TRIM49CP0CI26 452 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 GARTP22102 1010 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 STAT1P42224 750 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 NAP1L1P55209 391 aaKnown RBP9.94□□□□□ -0.82
PDPN-201ENST00000294489 CDCA2Q69YH5 1023 aaPredicted RBP9.94□□□□□ -0.82
PDPN-201ENST00000294489 IRF2BP2Q7Z5L9 587 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 NPLOC4Q8TAT6 608 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 COPS5Q92905 334 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 IFT74Q96LB3 600 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 CBWD1Q9BRT8 395 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 AZI2Q9H6S1 392 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 CCDC172P0C7W6 258 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 FERP16591 822 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 PRKCIP41743 596 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 TM4SF4P48230 202 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 VAMP7P51809 220 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 JAM2P57087 298 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 CKAP4Q07065 602 aaKnown RBP9.93□□□□□ -0.82
PDPN-201ENST00000294489 MKRN4PQ13434 485 aaPredicted RBP9.93□□□□□ -0.82
PDPN-201ENST00000294489 CBWD6Q4V339 395 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 CBWD3Q5JTY5 395 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 CBWD5Q5RIA9 395 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 WDR78Q5VTH9 848 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 LINC01465Q8N7H1 131 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 LMO3Q8TAP4 145 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 MFSD14AQ96MC6 490 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 ARID3AQ99856 593 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 TINF2Q9BSI4 451 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 CCDC113Q9H0I3 377 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 COL1A2P08123 1366 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 A0A087X0T9 212 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 TISP43B9A030 160 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 MOCS3O95396 460 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 FAM228BP0C875 321 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 RFX1P22670 979 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 CNGA1P29973 690 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 PTK2Q05397 1052 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 IER5Q5VY09 327 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 IQSEC1Q6DN90 963 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 IQCEQ6IPM2 695 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 SLC7A3Q8WY07 619 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 STK33Q9BYT3 514 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 ABHD16BQ9H3Z7 469 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 HDAC6Q9UBN7 1215 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 KIAA0391O15091 583 aaKnown RBP9.93□□□□□ -0.82
PDPN-201ENST00000294489 HBP1O60381 514 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 CLDN10P78369 228 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 MAP2K5Q13163 448 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 KIAA0753Q2KHM9 967 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 DUSP28Q4G0W2 176 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 TMCO3Q6UWJ1 677 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 PLEKHO2Q8TD55 490 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 TMC2Q8TDI7 906 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 RPGRIP1Q96KN7 1286 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 KIFC3Q9BVG8 833 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 INTS2Q9H0H0 1204 aaKnown RBP9.93□□□□□ -0.82
PDPN-201ENST00000294489 APEX2Q9UBZ4 518 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 DNAJC12Q9UKB3 198 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 CAPN6Q9Y6Q1 641 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 DOCK3Q8IZD9 2030 aa9.93□□□□□ -0.82
PDPN-201ENST00000294489 NOP56O00567 594 aaKnown RBP9.92□□□□□ -0.82
PDPN-201ENST00000294489 OLFML2BQ68BL8 750 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 ZNF571Q7Z3V5 609 aaPredicted RBP9.92□□□□□ -0.82
PDPN-201ENST00000294489 USP37Q86T82 979 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 TCP11Q8WWU5 503 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 CCDC102AQ96A19 550 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 TMEM143Q96AN5 459 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 C16orf70Q9BSU1 422 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 SLC5A4Q9NY91 659 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 ADCY3O60266 1144 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 ANK1P16157 1881 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 SOX5P35711 763 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 CLCN6P51797 869 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 ACVR2BQ13705 512 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 CAPSQ13938 189 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 ZNF484Q5JVG2 852 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 GJB7Q6PEY0 223 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 DPP9Q86TI2 863 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 ZSWIM2Q8NEG5 633 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 CAGE1Q8TC20 777 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 VTI1AQ96AJ9 217 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 JPH2Q9BR39 696 aaPredicted RBP9.92□□□□□ -0.82
PDPN-201ENST00000294489 CPA4Q9UI42 421 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 GJD2Q9UKL4 321 aa9.92□□□□□ -0.82
PDPN-201ENST00000294489 F8VZ95 297 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 GFPT2O94808 682 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 LGALS2P05162 132 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 ADRB2P07550 413 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 PRLRP16471 622 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 SMPD1P17405 629 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms