RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 OR2W6PQ8NHA6 318 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 RBM41Q96IZ5 413 aaKnown RBP17.1■□□□□ 0.33
SSRP1-202ENST00000293880 V9GYQ6 96 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 FAM95CA0A1B0GW59 222 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 RPS6P62753 249 aaKnown RBP17.1■□□□□ 0.33
SSRP1-202ENST00000293880 MTMR1Q13613 665 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 DRAP1Q14919 205 aaPredicted RBP17.1■□□□□ 0.33
SSRP1-202ENST00000293880 RHPN2Q8IUC4 686 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 SIRT2Q8IXJ6 389 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 GCNAQ96QF7 691 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 TRIM51Q9BSJ1 452 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 MARCOQ9UEW3 520 aaPredicted RBP17.1■□□□□ 0.33
SSRP1-202ENST00000293880 MCAMP43121 646 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 CEP78Q5JTW2 689 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 CLMNQ96JQ2 1002 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.09■□□□□ 0.331e-7■■■■□ 22.7
SSRP1-202ENST00000293880 ATP6V0A4Q9HBG4 840 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 METP08581 1390 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 KRT38O76015 456 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 KANSL2Q9H9L4 492 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 TSC22D2O75157 780 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 ACCSLQ4AC99 568 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 THAP11Q96EK4 314 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 LRRC1Q9BTT6 524 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 SERPINB13Q9UIV8 391 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 UGGT1Q9NYU2 1555 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 UBTFL6P0CB48 400 aaPredicted RBP17.09■□□□□ 0.33
SSRP1-202ENST00000293880 COPB2P35606 906 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 PRELPP51888 382 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 COBLL1Q53SF7 1204 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 ADCK1Q86TW2 530 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 ARHGEF25Q86VW2 580 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 GALNT4Q8N4A0 578 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 COQ7Q99807 217 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 CARD9Q9H257 536 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 KIF28PB7ZC32 967 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 CHN1P15882 459 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 ARSEP51690 589 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 NFX1Q12986 1120 aaKnown RBP17.09■□□□□ 0.33
SSRP1-202ENST00000293880 DMC1Q14565 340 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 ZNF568Q3ZCX4 644 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 VPS39Q96JC1 886 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 CHCHD3Q9NX63 227 aaKnown RBP17.09■□□□□ 0.33
SSRP1-202ENST00000293880 STOML1Q9UBI4 398 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 ADD3Q9UEY8 706 aaKnown RBP17.09■□□□□ 0.33
SSRP1-202ENST00000293880 AMACRQ9UHK6 382 aa17.09■□□□□ 0.33
SSRP1-202ENST00000293880 USP17L10C9JJH3 530 aa17.08■□□□□ 0.33
SSRP1-202ENST00000293880 PRAMEP78395 509 aa17.08■□□□□ 0.33
SSRP1-202ENST00000293880 KCTD17Q8N5Z5 321 aa17.08■□□□□ 0.33
SSRP1-202ENST00000293880 TAF1DQ9H5J8 278 aaPredicted RBP17.08■□□□□ 0.33
SSRP1-202ENST00000293880 MYO1GB0I1T2 1018 aa17.08■□□□□ 0.33
SSRP1-202ENST00000293880 DGKIO75912 1065 aa17.08■□□□□ 0.33
SSRP1-202ENST00000293880 KCNA2P16389 499 aa17.08■□□□□ 0.33
SSRP1-202ENST00000293880 PGM1P36871 562 aa17.08■□□□□ 0.33
SSRP1-202ENST00000293880 SAMD9Q5K651 1589 aa17.08■□□□□ 0.33
SSRP1-202ENST00000293880 WDR47O94967 919 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 VAMP7P51809 220 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 PSMC5P62195 406 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 TJAP1Q5JTD0 557 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 SEPT12Q8IYM1 358 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 PHF20L1A8MW92 1017 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 ATP5HO75947 161 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 APOA1P02647 267 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 TMEM154Q6P9G4 183 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 ANO5Q75V66 913 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 SP110Q9HB58 689 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 SEL1LQ9UBV2 794 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 CCDC188H7C350 402 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 FOSL2P15408 326 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 IFNAR1P17181 557 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 KIF2BQ8N4N8 673 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 TEKT4Q8WW24 435 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 WDR24Q96S15 920 aa17.08■□□□□ 0.32
SSRP1-202ENST00000293880 SASH1O94885 1247 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 TRIM49P0CI25 452 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 TRIM49CP0CI26 452 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 RNF219Q5W0B1 726 aaPredicted RBP17.07■□□□□ 0.32
SSRP1-202ENST00000293880 HEATR6Q6AI08 1181 aaKnown RBP17.07■□□□□ 0.32
SSRP1-202ENST00000293880 SLC30A9Q6PML9 568 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 CATSPER4Q7RTX7 472 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 ZNF473Q8WTR7 871 aaKnown RBP17.07■□□□□ 0.32
SSRP1-202ENST00000293880 SERPINB2P05120 415 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 CDC27P30260 824 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 PADI6Q6TGC4 694 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 DHX35Q9H5Z1 703 aaKnown RBP17.07■□□□□ 0.32
SSRP1-202ENST00000293880 SLC8A2Q9UPR5 921 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 PTPN12Q05209 780 aaKnown RBP17.07■□□□□ 0.32
SSRP1-202ENST00000293880 TBL3Q12788 808 aaKnown RBP17.07■□□□□ 0.32
SSRP1-202ENST00000293880 MTM1Q13496 603 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 SMARCA1P28370 1054 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 NECTIN1Q15223 517 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 PPP4R3CPQ6ZMV5 832 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 WDR48Q8TAF3 677 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 CCDC17Q96LX7 622 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 SIK2Q9H0K1 926 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 CLDN3O15551 220 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 HDAC4P56524 1084 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 PPP1R2P3Q6NXS1 205 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 ZBTB10Q96DT7 871 aa17.07■□□□□ 0.32
SSRP1-202ENST00000293880 LEMD3Q9Y2U8 911 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms