RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 ZNF526Q8TF50 670 aaPredicted RBP19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 SCFD2Q8WU76 684 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 STRA6Q9BX79 667 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 PCIF1Q9H4Z3 704 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 PCDHA10Q9Y5I2 948 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 PAPPA2Q9BXP8 1791 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 BHMG1C9JSJ3 638 aaPredicted RBP19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 LYPLA2O95372 231 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 ECHS1P30084 290 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 EPHX2P34913 555 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 HSD17B3P37058 310 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 PEX3P56589 373 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 ERVK-9P63128 1117 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 BIRC3Q13489 604 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 TRADDQ15628 312 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 FAM102BQ5T8I3 360 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 DPY19L2P1Q6NXN4 242 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 NCAPG2Q86XI2 1143 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 FAM186BQ8IYM0 893 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 BORCS6Q96GS4 357 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 PACSIN1Q9BY11 444 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 GANQ9H2C0 597 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 MYO1FO00160 1098 aa19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 KCNK3O14649 394 aa19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 SLC16A4O15374 487 aa19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 KIF4AO95239 1232 aa19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 SFNP31947 248 aa19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 SEC24CP53992 1094 aa19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 ACTN3Q08043 901 aaPredicted RBP19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 HLTFQ14527 1009 aaKnown RBP eCLIP19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 RUFY4Q6ZNE9 571 aa19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 CCDC60Q8IWA6 550 aaPredicted RBP19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 FAM133AQ8N9E0 248 aa19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 LARSQ9P2J5 1176 aaKnown RBP19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 AJAP1Q9UKB5 411 aaPredicted RBP19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 MYPNQ86TC9 1320 aa19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 E7EVH7 732 aa19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 TRIM49P0CI25 452 aa19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 TRIM49CP0CI26 452 aa19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 XRRA1Q6P2D8 792 aa19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 GJB7Q6PEY0 223 aa19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 C6orf89Q6UWU4 347 aa19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 SEPT14Q6ZU15 432 aa19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 JPH1Q9HDC5 661 aaPredicted RBP19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 BZW2Q9Y6E2 419 aaKnown RBP19.79■□□□□ 0.76
PDLIM3-201ENST00000284767 ATP8B3O60423 1300 aa19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 H0YGN5 161 aa19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 PON1P27169 355 aa19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 RNASE9P60153 205 aaKnown RBP19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 ZNF746Q6NUN9 644 aaPredicted RBP19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 DPY19L2Q6NUT2 758 aa19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 HS2ST1Q7LGA3 356 aa19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 NFS1Q9Y697 457 aa19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 A0A0G2JLL6 359 aaPredicted RBP19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 TULP1O00294 542 aaPredicted RBP19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 SLC16A3O15427 465 aaKnown RBP19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 PLS3P13797 630 aa19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 MTMR3Q13615 1198 aa19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 CYFIP1Q7L576 1253 aa19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 EEPD1Q7L9B9 569 aa19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 PRRT2Q7Z6L0 340 aaPredicted RBP19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 SPATC1LQ9H0A9 340 aa19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 ASCC2Q9H1I8 757 aaPredicted RBP19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 TXNRD2Q9NNW7 524 aa19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 SLC9A2Q9UBY0 812 aa19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 LOXHD1Q8IVV2 1947 aa19.78■□□□□ 0.76
PDLIM3-201ENST00000284767 PSMC2P35998 433 aaKnown RBP19.77■□□□□ 0.76
PDLIM3-201ENST00000284767 SMTNP53814 917 aa19.77■□□□□ 0.76
PDLIM3-201ENST00000284767 ACTR2P61160 394 aa19.77■□□□□ 0.76
PDLIM3-201ENST00000284767 EXOC3L4Q17RC7 722 aa19.77■□□□□ 0.76
PDLIM3-201ENST00000284767 RNF187Q5TA31 235 aaPredicted RBP19.77■□□□□ 0.76
PDLIM3-201ENST00000284767 ANKRD13AQ8IZ07 590 aa19.77■□□□□ 0.76
PDLIM3-201ENST00000284767 CYFIP2Q96F07 1278 aa19.77■□□□□ 0.76
PDLIM3-201ENST00000284767 CBWD1Q9BRT8 395 aa19.77■□□□□ 0.76
PDLIM3-201ENST00000284767 WDR81Q562E7 1941 aa19.77■□□□□ 0.76
PDLIM3-201ENST00000284767 SPATA31C2B4DYI2 1134 aa19.77■□□□□ 0.75
PDLIM3-201ENST00000284767 CCDC188H7C350 402 aa19.77■□□□□ 0.75
PDLIM3-201ENST00000284767 HPDP32754 393 aaPredicted RBP19.77■□□□□ 0.75
PDLIM3-201ENST00000284767 PPATQ06203 517 aa19.77■□□□□ 0.75
PDLIM3-201ENST00000284767 AGBL2Q5U5Z8 902 aa19.77■□□□□ 0.75
PDLIM3-201ENST00000284767 HAUS6Q7Z4H7 955 aa19.77■□□□□ 0.75
PDLIM3-201ENST00000284767 ERO1BQ86YB8 467 aa19.77■□□□□ 0.75
PDLIM3-201ENST00000284767 BSNDQ8WZ55 320 aa19.77■□□□□ 0.75
PDLIM3-201ENST00000284767 CEP170P1Q96L14 293 aa19.77■□□□□ 0.75
PDLIM3-201ENST00000284767 ACTR5Q9H9F9 607 aaPredicted RBP19.77■□□□□ 0.75
PDLIM3-201ENST00000284767 METTL14Q9HCE5 456 aaKnown RBP19.77■□□□□ 0.75
PDLIM3-201ENST00000284767 SLC12A6Q9UHW9 1150 aa19.77■□□□□ 0.75
PDLIM3-201ENST00000284767 GMNCA6NCL1 334 aa19.76■□□□□ 0.75
PDLIM3-201ENST00000284767 PGRMC1O00264 195 aaKnown RBP19.76■□□□□ 0.75
PDLIM3-201ENST00000284767 STBD1O95210 358 aa19.76■□□□□ 0.75
PDLIM3-201ENST00000284767 POTEJP0CG39 1038 aa19.76■□□□□ 0.75
PDLIM3-201ENST00000284767 ANXA13P27216 316 aa19.76■□□□□ 0.75
PDLIM3-201ENST00000284767 CTNNA1P35221 906 aaKnown RBP19.76■□□□□ 0.75
PDLIM3-201ENST00000284767 ZNF844Q08AG5 666 aa19.76■□□□□ 0.75
PDLIM3-201ENST00000284767 UAP1Q16222 522 aaPredicted RBP19.76■□□□□ 0.75
PDLIM3-201ENST00000284767 STXBP4Q6ZWJ1 553 aa19.76■□□□□ 0.75
PDLIM3-201ENST00000284767 LRRC57Q8N9N7 239 aa19.76■□□□□ 0.75
PDLIM3-201ENST00000284767 CHST13Q8NET6 341 aa19.76■□□□□ 0.75
PDLIM3-201ENST00000284767 DMAC2Q9NW81 257 aa19.76■□□□□ 0.75
PDLIM3-201ENST00000284767 GCNT4Q9P109 453 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms