RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 ITIH4Q14624 930 aa12.23□□□□□ -0.45
SCLT1-201ENST00000281142 KIAA1755Q5JYT7 1200 aa12.23□□□□□ -0.45
SCLT1-201ENST00000281142 TTC27Q6P3X3 843 aa12.23□□□□□ -0.45
SCLT1-201ENST00000281142 FOXR2Q6PJQ5 311 aa12.23□□□□□ -0.45
SCLT1-201ENST00000281142 USP50Q70EL3 339 aaPredicted RBP12.23□□□□□ -0.45
SCLT1-201ENST00000281142 CPNE8Q86YQ8 564 aa12.23□□□□□ -0.45
SCLT1-201ENST00000281142 ZC3H3Q8IXZ2 948 aaKnown RBP12.23□□□□□ -0.45
SCLT1-201ENST00000281142 KRT35Q92764 455 aa12.23□□□□□ -0.45
SCLT1-201ENST00000281142 RAB17Q9H0T7 212 aa12.23□□□□□ -0.45
SCLT1-201ENST00000281142 RIOX1Q9H6W3 641 aa12.23□□□□□ -0.45
SCLT1-201ENST00000281142 ARHGEF10LQ9HCE6 1279 aa12.23□□□□□ -0.45
SCLT1-201ENST00000281142 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.23□□□□□ -0.45
SCLT1-201ENST00000281142 ESYT2A0FGR8 921 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 TMEM110-MUSTN1A8MSY1 372 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 ENTPD3O75355 529 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 PABPC4Q13310 644 aaKnown RBP eCLIP12.22□□□□□ -0.45
SCLT1-201ENST00000281142 PLS1Q14651 629 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 TAX1BP1Q86VP1 789 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 NEDD1Q8NHV4 660 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 KCNV2Q8TDN2 545 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 PGM2Q96G03 612 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 THAP2Q9H0W7 228 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 NMRK2Q9NPI5 230 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 SEPT11Q9NVA2 429 aaKnown RBP12.22□□□□□ -0.45
SCLT1-201ENST00000281142 TCRBV7S2A1N4TA0A589 114 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 SNX3O60493 162 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 GSTA1P08263 222 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 CNGA2Q16280 664 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 EAPPQ56P03 285 aaPredicted RBP12.22□□□□□ -0.45
SCLT1-201ENST00000281142 FKBP1CQ5VVH2 108 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 CCDC25Q86WR0 208 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 SLC35C1Q96A29 364 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 PGAP2Q9UHJ9 254 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 BZW2Q9Y6E2 419 aaKnown RBP12.22□□□□□ -0.45
SCLT1-201ENST00000281142 SFI1A8K8P3 1242 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 TCP11X1B4DZS4 312 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 PPATQ06203 517 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 AUHQ13825 339 aaKnown RBP12.22□□□□□ -0.45
SCLT1-201ENST00000281142 LONRF1Q17RB8 773 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 DLK2Q6UY11 383 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 FAM83AQ86UY5 434 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 SYCE1Q8N0S2 351 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 FAM151AQ8WW52 585 aa12.22□□□□□ -0.45
SCLT1-201ENST00000281142 POP1Q99575 1024 aaKnown RBP12.22□□□□□ -0.45
SCLT1-201ENST00000281142 DDX23Q9BUQ8 820 aaKnown RBP12.22□□□□□ -0.45
SCLT1-201ENST00000281142 ATRNL1Q5VV63 1379 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 COL2A1P02458 1487 aaPredicted RBP12.21□□□□□ -0.45
SCLT1-201ENST00000281142 CCDC169A6NNP5 214 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 USP17L15C9J2P7 530 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 USP17L13C9JLJ4 530 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 USP17L11C9JVI0 530 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 USP17L18D6R9N7 530 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 USP17L22D6RA61 530 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 USP17L17D6RBQ6 530 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 USP17L19D6RCP7 530 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 USP17L20D6RJB6 530 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 PTGIRP43119 386 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 SLC12A3P55017 1021 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 USP17L24Q0WX57 530 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 ORC2Q13416 577 aaPredicted RBP12.21□□□□□ -0.45
SCLT1-201ENST00000281142 ZNF268Q14587 947 aaPredicted RBP12.21□□□□□ -0.45
SCLT1-201ENST00000281142 RASA3Q14644 834 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 EDRF1Q3B7T1 1238 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 USP17L6PQ6QN14 398 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 EXOC3L1Q86VI1 746 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 KSR1Q8IVT5 923 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 SPDYE1Q8NFV5 336 aaPredicted RBP12.21□□□□□ -0.45
SCLT1-201ENST00000281142 SLC30A5Q8TAD4 765 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 REEP2Q9BRK0 252 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 FAM167BQ9BTA0 163 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 DHX36Q9H2U1 1008 aaKnown RBP12.21□□□□□ -0.45
SCLT1-201ENST00000281142 BATF3Q9NR55 127 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 CTNNAL1Q9UBT7 734 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 PTPN22Q9Y2R2 807 aa12.21□□□□□ -0.45
SCLT1-201ENST00000281142 KCNJ1P48048 391 aa12.21□□□□□ -0.46
SCLT1-201ENST00000281142 ADCY1Q08828 1119 aa12.21□□□□□ -0.46
SCLT1-201ENST00000281142 MAPK7Q13164 816 aa12.21□□□□□ -0.46
SCLT1-201ENST00000281142 GIT2Q14161 759 aa12.21□□□□□ -0.46
SCLT1-201ENST00000281142 KNOP1Q1ED39 458 aaKnown RBP12.21□□□□□ -0.46
SCLT1-201ENST00000281142 C16orf86Q6ZW13 317 aa12.21□□□□□ -0.46
SCLT1-201ENST00000281142 FRMD5Q7Z6J6 570 aa12.21□□□□□ -0.46
SCLT1-201ENST00000281142 PRELID2Q8N945 189 aa12.21□□□□□ -0.46
SCLT1-201ENST00000281142 ANKRD42Q8N9B4 389 aa12.21□□□□□ -0.46
SCLT1-201ENST00000281142 GDAP1Q8TB36 358 aa12.21□□□□□ -0.46
SCLT1-201ENST00000281142 DEFB129Q9H1M3 183 aa12.21□□□□□ -0.46
SCLT1-201ENST00000281142 DNAJC17Q9NVM6 304 aaKnown RBP12.21□□□□□ -0.46
SCLT1-201ENST00000281142 ASTN1O14525 1302 aa12.21□□□□□ -0.46
SCLT1-201ENST00000281142 A0A0A6YYK5 440 aaPredicted RBP12.2□□□□□ -0.46
SCLT1-201ENST00000281142 GH1P01241 217 aa12.2□□□□□ -0.46
SCLT1-201ENST00000281142 NR3C1P04150 777 aa12.2□□□□□ -0.46
SCLT1-201ENST00000281142 SEPT2Q15019 361 aa12.2□□□□□ -0.46
SCLT1-201ENST00000281142 PRAMEF18Q5VWM3 479 aa12.2□□□□□ -0.46
SCLT1-201ENST00000281142 CRELD2Q6UXH1 353 aaPredicted RBP12.2□□□□□ -0.46
SCLT1-201ENST00000281142 SLC30A10Q6XR72 485 aa12.2□□□□□ -0.46
SCLT1-201ENST00000281142 SEPT14Q6ZU15 432 aa12.2□□□□□ -0.46
SCLT1-201ENST00000281142 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.2□□□□□ -0.46
SCLT1-201ENST00000281142 SAAL1Q96ER3 474 aa12.2□□□□□ -0.46
SCLT1-201ENST00000281142 TEPSINQ96N21 525 aa12.2□□□□□ -0.46
SCLT1-201ENST00000281142 JMJD4Q9H9V9 463 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms