RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 CXCL16Q9H2A7 254 aa12.77□□□□□ -0.36
SSRP1-201ENST00000278412 UBE4BO95155 1302 aa12.77□□□□□ -0.37
SSRP1-201ENST00000278412 TREHO43280 583 aa12.77□□□□□ -0.37
SSRP1-201ENST00000278412 SMIM10L2AP0DMW4 78 aa12.77□□□□□ -0.37
SSRP1-201ENST00000278412 SMIM10L2BP0DMW5 78 aa12.77□□□□□ -0.37
SSRP1-201ENST00000278412 CYP27A1Q02318 531 aa12.77□□□□□ -0.37
SSRP1-201ENST00000278412 MAP2K1Q02750 393 aaPredicted RBP12.77□□□□□ -0.37
SSRP1-201ENST00000278412 FOXR2Q6PJQ5 311 aa12.77□□□□□ -0.37
SSRP1-201ENST00000278412 SEMA4DQ92854 862 aa12.77□□□□□ -0.37
SSRP1-201ENST00000278412 PPP1R13BQ96KQ4 1090 aa12.77□□□□□ -0.37
SSRP1-201ENST00000278412 PI4K2AQ9BTU6 479 aa12.77□□□□□ -0.37
SSRP1-201ENST00000278412 OSBPL7Q9BZF2 842 aa12.77□□□□□ -0.37
SSRP1-201ENST00000278412 CCDC113Q9H0I3 377 aa12.77□□□□□ -0.37
SSRP1-201ENST00000278412 GANQ9H2C0 597 aa12.77□□□□□ -0.37
SSRP1-201ENST00000278412 PDE11AQ9HCR9 933 aa12.77□□□□□ -0.37
SSRP1-201ENST00000278412 REXO2Q9Y3B8 237 aaKnown RBP12.77□□□□□ -0.37
SSRP1-201ENST00000278412 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.77□□□□□ -0.372e-8■■■□□ 18.1
SSRP1-201ENST00000278412 LRRIQ3A6PVS8 624 aaPredicted RBP12.76□□□□□ -0.37
SSRP1-201ENST00000278412 HOXD8P13378 290 aaPredicted RBP12.76□□□□□ -0.37
SSRP1-201ENST00000278412 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
SSRP1-201ENST00000278412 MATR3P43243 847 aaKnown RBP eCLIP12.76□□□□□ -0.37
SSRP1-201ENST00000278412 FMO5P49326 533 aa12.76□□□□□ -0.37
SSRP1-201ENST00000278412 RTP1P59025 263 aa12.76□□□□□ -0.37
SSRP1-201ENST00000278412 DMTNQ08495 405 aa12.76□□□□□ -0.37
SSRP1-201ENST00000278412 KIAA0319LQ8IZA0 1049 aa12.76□□□□□ -0.37
SSRP1-201ENST00000278412 ACP6Q9NPH0 428 aa12.76□□□□□ -0.37
SSRP1-201ENST00000278412 SLC16A3O15427 465 aaKnown RBP12.76□□□□□ -0.37
SSRP1-201ENST00000278412 GNA14O95837 355 aa12.76□□□□□ -0.37
SSRP1-201ENST00000278412 VAMP7P51809 220 aa12.76□□□□□ -0.37
SSRP1-201ENST00000278412 FSCN1Q16658 493 aaKnown RBP12.76□□□□□ -0.37
SSRP1-201ENST00000278412 LINC01465Q8N7H1 131 aa12.76□□□□□ -0.37
SSRP1-201ENST00000278412 ZNF516Q92618 1163 aa12.76□□□□□ -0.37
SSRP1-201ENST00000278412 WNT8BQ93098 351 aa12.76□□□□□ -0.37
SSRP1-201ENST00000278412 PANX2Q96RD6 677 aa12.76□□□□□ -0.37
SSRP1-201ENST00000278412 DNAJC7Q99615 494 aa12.76□□□□□ -0.37
SSRP1-201ENST00000278412 ARHGAP20Q9P2F6 1191 aa12.76□□□□□ -0.37
SSRP1-201ENST00000278412 SIP14410 1827 aa12.76□□□□□ -0.37
SSRP1-201ENST00000278412 F2P00734 622 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 GNASQ5JWF2 1037 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 IER5Q5VY09 327 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 SLC9A9Q8IVB4 645 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 REXO1L1PQ8IX06 675 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 TMEM40Q8WWA1 233 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 TMEM117Q9H0C3 514 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 C17orf75Q9HAS0 396 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 HDAC6Q9UBN7 1215 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 RCCD1A6NED2 376 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 ZNF263O14978 683 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 MEFVO15553 781 aaPredicted RBP12.75□□□□□ -0.37
SSRP1-201ENST00000278412 PRKCBP05771 671 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 MBTD1Q05BQ5 628 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 STRN3Q13033 797 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 RAPGEF1Q13905 1077 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 MFSD10Q14728 455 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 EXOC3L4Q17RC7 722 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 TRIM65Q6PJ69 517 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 CNGA4Q8IV77 575 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 ARHGEF19Q8IW93 802 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 NEK11Q8NG66 645 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 OR8K1Q8NGG5 319 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 LZTFL1Q9NQ48 299 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 FAM184BQ9ULE4 1060 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 PPP2R2CQ9Y2T4 447 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 ABLIM1O14639 778 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 PHLDB3Q6NSJ2 640 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 THNSL1Q8IYQ7 743 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 LMO3Q8TAP4 145 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 ZNF296Q8WUU4 475 aaPredicted RBP12.75□□□□□ -0.37
SSRP1-201ENST00000278412 FAM212AQ96EL1 285 aa12.75□□□□□ -0.37
SSRP1-201ENST00000278412 RANBP2P49792 3224 aaKnown RBP12.74□□□□□ -0.37
SSRP1-201ENST00000278412 UCHL3P15374 230 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 SLC26A2P50443 739 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 PURAQ00577 322 aaKnown RBP12.74□□□□□ -0.37
SSRP1-201ENST00000278412 NFIL3Q16649 462 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 BRDTQ58F21 947 aaPredicted RBP12.74□□□□□ -0.37
SSRP1-201ENST00000278412 CDCA2Q69YH5 1023 aaPredicted RBP12.74□□□□□ -0.37
SSRP1-201ENST00000278412 IQCEQ6IPM2 695 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 NFRKBQ6P4R8 1299 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 PARD3BQ8TEW8 1205 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 DNAJB3Q8WWF6 145 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 ZNF592Q92610 1267 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 TCHPQ9BT92 498 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 MSTO1Q9BUK6 570 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 AGO2Q9UKV8 859 aaKnown RBP12.74□□□□□ -0.37
SSRP1-201ENST00000278412 ZNF215Q9UL58 517 aaPredicted RBP12.74□□□□□ -0.37
SSRP1-201ENST00000278412 FAM189A1O60320 539 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 STX10O60499 249 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 AKR1A1P14550 325 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 ZBED6P86452 979 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 MYL7Q01449 175 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 CYP24A1Q07973 514 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 ALCAMQ13740 583 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 KLHDC7AQ5VTJ3 777 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 SPOPLQ6IQ16 392 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 MSL3Q8N5Y2 521 aaKnown RBP12.74□□□□□ -0.37
SSRP1-201ENST00000278412 OR5B17Q8NGF7 314 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 TAS1R2Q8TE23 839 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 NLRP7Q8WX94 980 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 OSMRQ99650 979 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 ADGRG1Q9Y653 693 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms