RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 UBE2TQ9NPD8 197 aaPredicted RBP20.05■□□□□ 0.8
SSC4D-201ENST00000275560 FRMPD4Q14CM0 1322 aa20.05■□□□□ 0.8
SSC4D-201ENST00000275560 FAM13AO94988 1023 aa20.05■□□□□ 0.8
SSC4D-201ENST00000275560 CETPP11597 493 aa20.05■□□□□ 0.8
SSC4D-201ENST00000275560 RRP1BQ14684 758 aaKnown RBP20.05■□□□□ 0.8
SSC4D-201ENST00000275560 KYNUQ16719 465 aa20.05■□□□□ 0.8
SSC4D-201ENST00000275560 SEL1L2Q5TEA6 688 aa20.05■□□□□ 0.8
SSC4D-201ENST00000275560 RPUSD2Q8IZ73 545 aaKnown RBP20.05■□□□□ 0.8
SSC4D-201ENST00000275560 ATG4AQ8WYN0 398 aa20.05■□□□□ 0.8
SSC4D-201ENST00000275560 TGS1Q96RS0 853 aaKnown RBP20.05■□□□□ 0.8
SSC4D-201ENST00000275560 ARHGEF3Q9NR81 526 aa20.05■□□□□ 0.8
SSC4D-201ENST00000275560 NKX1-2Q9UD57 310 aaPredicted RBP20.05■□□□□ 0.8
SSC4D-201ENST00000275560 ATP8B3O60423 1300 aa20.05■□□□□ 0.8
SSC4D-201ENST00000275560 ENO4A6NNW6 628 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 PODXLO00592 558 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 GNPATO15228 680 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 MSH4O15457 936 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 ALAS1P13196 640 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 ABL2P42684 1182 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 ANKRD20A2Q5SQ80 823 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 ANKRD20A1Q5TYW2 823 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 ANKRD20A3Q5VUR7 823 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 BTNL9Q6UXG8 535 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 TPH2Q8IWU9 490 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 ERMNQ8TAM6 284 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 PCDHB18PQ96TA0 734 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 EIF2AK1Q9BQI3 630 aaKnown RBP20.04■□□□□ 0.8
SSC4D-201ENST00000275560 TNRC6CQ9HCJ0 1690 aaKnown RBP20.04■□□□□ 0.8
SSC4D-201ENST00000275560 CLDN3O15551 220 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 MYBL1P10243 752 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 CHRNB2P17787 502 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 SATB1Q01826 763 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 SLMAPQ14BN4 828 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 TRIM68Q6AZZ1 485 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 CCHCR1Q8TD31 782 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 TMEM109Q9BVC6 243 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 PCIF1Q9H4Z3 704 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 NARFQ9UHQ1 456 aa20.04■□□□□ 0.8
SSC4D-201ENST00000275560 BRAFP15056 766 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 CCND1P24385 295 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 SIX1Q15475 284 aaPredicted RBP20.03■□□□□ 0.8
SSC4D-201ENST00000275560 UTP4Q969X6 686 aaKnown RBP20.03■□□□□ 0.8
SSC4D-201ENST00000275560 TMEM237Q96Q45 408 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 FAM118BQ9BPY3 351 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 DNAJC18Q9H819 358 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.03■□□□□ 0.8
SSC4D-201ENST00000275560 PPP1R12AO14974 1030 aaPredicted RBP20.03■□□□□ 0.8
SSC4D-201ENST00000275560 SHMT1P34896 483 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 GRAPQ13588 217 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 MFSD5Q6N075 450 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 SLC13A5Q86YT5 568 aaPredicted RBP20.03■□□□□ 0.8
SSC4D-201ENST00000275560 GRAPLQ8TC17 118 aaPredicted RBP20.03■□□□□ 0.8
SSC4D-201ENST00000275560 TBC1D22AQ8WUA7 517 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 PAIP2Q9BPZ3 127 aaKnown RBP20.03■□□□□ 0.8
SSC4D-201ENST00000275560 STMN4Q9H169 189 aaPredicted RBP20.03■□□□□ 0.8
SSC4D-201ENST00000275560 ZMYND8Q9ULU4 1186 aaPredicted RBP20.03■□□□□ 0.8
SSC4D-201ENST00000275560 ARL2BPQ9Y2Y0 163 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 SPATA31A1Q5TZJ5 1347 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 CYP3A7-CYP3A51PA0A087WV96 503 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 SPOPO43791 374 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 CYP3A7P24462 503 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 ZNF131P52739 623 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 CAPRIN2Q6IMN6 1127 aaKnown RBP20.03■□□□□ 0.8
SSC4D-201ENST00000275560 RNF207Q6ZRF8 634 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 ASRGL1Q7L266 308 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 ECHDC2Q86YB7 292 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 SRRM1Q8IYB3 904 aaKnown RBP20.03■□□□□ 0.8
SSC4D-201ENST00000275560 ETNK1Q9HBU6 452 aa20.03■□□□□ 0.8
SSC4D-201ENST00000275560 SMNDC1O75940 238 aaKnown RBP eCLIP20.02■□□□□ 0.8
SSC4D-201ENST00000275560 SGPL1O95470 568 aa20.02■□□□□ 0.8
SSC4D-201ENST00000275560 KRT17Q04695 432 aa20.02■□□□□ 0.8
SSC4D-201ENST00000275560 CALCOCO2Q13137 446 aa20.02■□□□□ 0.8
SSC4D-201ENST00000275560 RHOT2Q8IXI1 618 aa20.02■□□□□ 0.8
SSC4D-201ENST00000275560 ZSWIM2Q8NEG5 633 aa20.02■□□□□ 0.8
SSC4D-201ENST00000275560 CKAP2Q8WWK9 683 aa20.02■□□□□ 0.8
SSC4D-201ENST00000275560 SPOCK2Q92563 424 aa20.02■□□□□ 0.8
SSC4D-201ENST00000275560 YIPF3Q9GZM5 350 aa20.02■□□□□ 0.8
SSC4D-201ENST00000275560 PARP2Q9UGN5 583 aa20.02■□□□□ 0.8
SSC4D-201ENST00000275560 ASIC3Q9UHC3 531 aa20.02■□□□□ 0.8
SSC4D-201ENST00000275560 SERPINB13Q9UIV8 391 aa20.02■□□□□ 0.8
SSC4D-201ENST00000275560 SMCHD1A6NHR9 2005 aa20.02■□□□□ 0.8
SSC4D-201ENST00000275560 PASKQ96RG2 1323 aa20.02■□□□□ 0.79
SSC4D-201ENST00000275560 GJB6O95452 261 aa20.02■□□□□ 0.79
SSC4D-201ENST00000275560 ATP2A2P16615 1042 aaKnown RBP20.02■□□□□ 0.79
SSC4D-201ENST00000275560 MIGA2Q7L4E1 593 aa20.02■□□□□ 0.79
SSC4D-201ENST00000275560 MBOAT7Q96N66 472 aa20.02■□□□□ 0.79
SSC4D-201ENST00000275560 RXFP1Q9HBX9 757 aa20.02■□□□□ 0.79
SSC4D-201ENST00000275560 AGPAT3Q9NRZ7 376 aa20.02■□□□□ 0.79
SSC4D-201ENST00000275560 VAV3Q9UKW4 847 aa20.02■□□□□ 0.79
SSC4D-201ENST00000275560 PLIN4Q96Q06 1357 aa20.01■□□□□ 0.79
SSC4D-201ENST00000275560 CALCAP01258 141 aa20.01■□□□□ 0.79
SSC4D-201ENST00000275560 GPC5P78333 572 aa20.01■□□□□ 0.79
SSC4D-201ENST00000275560 GTF2IP78347 998 aa20.01■□□□□ 0.79
SSC4D-201ENST00000275560 KIF22Q14807 665 aa20.01■□□□□ 0.79
SSC4D-201ENST00000275560 GPATCH4Q5T3I0 446 aaKnown RBP20.01■□□□□ 0.79
SSC4D-201ENST00000275560 PHLDB2Q86SQ0 1253 aa20.01■□□□□ 0.79
SSC4D-201ENST00000275560 KIAA0825Q8IV33 1275 aa20.01■□□□□ 0.79
SSC4D-201ENST00000275560 CHST7Q9NS84 486 aa20.01■□□□□ 0.79
SSC4D-201ENST00000275560 PRKAG3Q9UGI9 489 aa20.01■□□□□ 0.79
SSC4D-201ENST00000275560 FRMD4BQ9Y2L6 1034 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms