RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 RFX8Q6ZV50 586 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 TBC1D1Q86TI0 1168 aaPredicted RBP12.62□□□□□ -0.39
SHPRH-201ENST00000275233 LZICQ8WZA0 190 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 TRPV6Q9H1D0 765 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 ESYT3A0FGR9 886 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 LUC7L3O95232 432 aaKnown RBP12.62□□□□□ -0.39
SHPRH-201ENST00000275233 ASMTLO95671 621 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 FOXO4P98177 505 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 SYT2Q8N9I0 419 aaPredicted RBP12.62□□□□□ -0.39
SHPRH-201ENST00000275233 CEP19Q96LK0 163 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 DRC3Q9H069 523 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 JPH1Q9HDC5 661 aaPredicted RBP12.62□□□□□ -0.39
SHPRH-201ENST00000275233 IP6K2Q9UHH9 426 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 STAP1Q9ULZ2 295 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 KCNH4Q9UQ05 1017 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 DYNC1LI2O43237 492 aaPredicted RBP12.61□□□□□ -0.39
SHPRH-201ENST00000275233 RARBP10826 455 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 TBXAS1P24557 533 aaPredicted RBP12.61□□□□□ -0.39
SHPRH-201ENST00000275233 ESRRGP62508 458 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 PDIA2Q13087 525 aaKnown RBP12.61□□□□□ -0.39
SHPRH-201ENST00000275233 USP33Q8TEY7 942 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 AGAP3Q96P47 875 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 NR1H4Q96RI1 486 aaPredicted RBP12.61□□□□□ -0.39
SHPRH-201ENST00000275233 UPF3AQ9H1J1 476 aaKnown RBP12.61□□□□□ -0.39
SHPRH-201ENST00000275233 ANKRD65E5RJM6 399 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 PODXLO00592 558 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 PDGFRBP09619 1106 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 CYP2B6P20813 491 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 CUL1Q13616 776 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 TFDP2Q14188 446 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.61□□□□□ -0.39
SHPRH-201ENST00000275233 HECW2Q9P2P5 1572 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 ZC3H4Q9UPT8 1303 aaKnown RBP12.61□□□□□ -0.39
SHPRH-201ENST00000275233 KIF28PB7ZC32 967 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 H0Y3Z8 333 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 CYP26A1O43174 497 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 CDH6P55285 790 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 PTK2BQ14289 1009 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 NAALADL2Q58DX5 795 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 ANKMY2Q8IV38 441 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 DDIASQ8IXT1 998 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 ZBED8Q8IZ13 594 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 TRIM55Q9BYV6 548 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 CYP26B1Q9NR63 512 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 TADA2AO75478 443 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 PRKCBP05771 671 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 SMARCA1P28370 1054 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 EEF1DP29692 281 aaKnown RBP12.61□□□□□ -0.39
SHPRH-201ENST00000275233 VEPH1Q14D04 833 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 ALS2CLQ60I27 953 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 CC2D1AQ6P1N0 951 aaPredicted RBP12.61□□□□□ -0.39
SHPRH-201ENST00000275233 MB21D2Q8IYB1 491 aaPredicted RBP12.61□□□□□ -0.39
SHPRH-201ENST00000275233 SLC30A5Q8TAD4 765 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 SCG3Q8WXD2 468 aaKnown RBP12.61□□□□□ -0.39
SHPRH-201ENST00000275233 TJP2Q9UDY2 1190 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 MKRN4PQ13434 485 aaPredicted RBP12.61□□□□□ -0.39
SHPRH-201ENST00000275233 BEND6Q5SZJ8 279 aaPredicted RBP12.61□□□□□ -0.39
SHPRH-201ENST00000275233 ACAD11Q709F0 780 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 PGBD3Q8N328 593 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 OTULINQ96BN8 352 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 POLR3CQ9BUI4 534 aaPredicted RBP12.61□□□□□ -0.39
SHPRH-201ENST00000275233 TRIM15Q9C019 465 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 DONSONQ9NYP3 566 aa12.61□□□□□ -0.39
SHPRH-201ENST00000275233 APOBEC2Q9Y235 224 aaKnown RBP12.61□□□□□ -0.39
SHPRH-201ENST00000275233 C6orf222P0C671 652 aaPredicted RBP12.6□□□□□ -0.39
SHPRH-201ENST00000275233 RALAP11233 206 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 LRRC14Q15048 493 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 SP8Q8IXZ3 490 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 SRBD1Q8N5C6 995 aaKnown RBP12.6□□□□□ -0.39
SHPRH-201ENST00000275233 ZNF513Q8N8E2 541 aaPredicted RBP12.6□□□□□ -0.39
SHPRH-201ENST00000275233 CLCA2Q9UQC9 943 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 TEX33O43247 280 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 TADA3O75528 432 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 STAT5BP51692 787 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 ZNF235Q14590 738 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 TAF1CQ15572 869 aaPredicted RBP12.6□□□□□ -0.39
SHPRH-201ENST00000275233 RFWD2Q8NHY2 731 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 ALG13Q9NP73 1137 aaKnown RBP12.6□□□□□ -0.39
SHPRH-201ENST00000275233 MAP3K20Q9NYL2 800 aaKnown RBP12.6□□□□□ -0.39
SHPRH-201ENST00000275233 FASTKD1Q53R41 847 aaKnown RBP12.6□□□□□ -0.39
SHPRH-201ENST00000275233 KRT39Q6A163 491 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 HIBCHQ6NVY1 386 aaPredicted RBP12.6□□□□□ -0.39
SHPRH-201ENST00000275233 RGS9BPQ6ZS82 235 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 PROM2Q8N271 834 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 KRT14P02533 472 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 PDCLQ13371 301 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 CPA5Q8WXQ8 436 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 ABTB1Q969K4 478 aaPredicted RBP12.6□□□□□ -0.39
SHPRH-201ENST00000275233 TMEM106CQ9BVX2 250 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 DDX47Q9H0S4 455 aaKnown RBP12.6□□□□□ -0.39
SHPRH-201ENST00000275233 SLC4A7Q9Y6M7 1214 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 STK36Q9NRP7 1315 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 PMS2P54278 862 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 BCAR1P56945 870 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 DUOXA2Q1HG44 320 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 PPP1R18Q6NYC8 613 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 PID1Q7Z2X4 250 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 WDR75Q8IWA0 830 aaKnown RBP12.6□□□□□ -0.39
SHPRH-201ENST00000275233 ADA2Q9NZK5 511 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 KIF17Q9P2E2 1029 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms