RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 MFSD5Q6N075 450 aa18.85■□□□□ 0.61
SKP2-201ENST00000274254 FOXR2Q6PJQ5 311 aa18.85■□□□□ 0.61
SKP2-201ENST00000274254 NELFBQ8WX92 580 aa18.85■□□□□ 0.61
SKP2-201ENST00000274254 VWCEQ96DN2 955 aa18.85■□□□□ 0.61
SKP2-201ENST00000274254 MED15Q96RN5 788 aa18.85■□□□□ 0.61
SKP2-201ENST00000274254 IFIH1Q9BYX4 1025 aaKnown RBP18.85■□□□□ 0.61
SKP2-201ENST00000274254 CGNQ9P2M7 1197 aaKnown RBP18.85■□□□□ 0.61
SKP2-201ENST00000274254 CTNND2Q9UQB3 1225 aa18.85■□□□□ 0.61
SKP2-201ENST00000274254 TISP43B9A030 160 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 TOM1L1O75674 476 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 ADSSP30520 456 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 RFC2P35250 354 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 LRRC63Q05C16 580 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 NCBP1Q09161 790 aaKnown RBP18.84■□□□□ 0.61
SKP2-201ENST00000274254 NFX1Q12986 1120 aaKnown RBP18.84■□□□□ 0.61
SKP2-201ENST00000274254 TTI2Q6NXR4 508 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 HS2ST1Q7LGA3 356 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 GOLGA5Q8TBA6 731 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 TMEM174Q8WUU8 243 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 CPB2Q96IY4 423 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 ANP32EQ9BTT0 268 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 TMX1Q9H3N1 280 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 PDZD7Q9H5P4 517 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 CHST12Q9NRB3 414 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 AGPAT3Q9NRZ7 376 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 PRKAG2Q9UGJ0 569 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 RWDD2AQ9UIY3 292 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 NFIL3Q16649 462 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 ANKRD40Q6AI12 368 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 NOTUMQ6P988 496 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 FAM43BQ6ZT52 329 aaPredicted RBP18.84■□□□□ 0.61
SKP2-201ENST00000274254 C12orf56Q8IXR9 622 aa18.84■□□□□ 0.61
SKP2-201ENST00000274254 ZBTB45Q96K62 511 aaPredicted RBP18.84■□□□□ 0.61
SKP2-201ENST00000274254 PIN4Q9Y237 131 aaKnown RBP18.84■□□□□ 0.61
SKP2-201ENST00000274254 BICDL2A1A5D9 508 aa18.83■□□□□ 0.6
SKP2-201ENST00000274254 TRIM49BA6NDI0 452 aa18.83■□□□□ 0.6
SKP2-201ENST00000274254 N4BP3O15049 544 aa18.83■□□□□ 0.6
SKP2-201ENST00000274254 MCL1Q07820 350 aa18.83■□□□□ 0.6
SKP2-201ENST00000274254 DSC3Q14574 896 aa18.83■□□□□ 0.6
SKP2-201ENST00000274254 EDRF1Q3B7T1 1238 aa18.83■□□□□ 0.6
SKP2-201ENST00000274254 EEF1DP3Q658K8 133 aa18.83■□□□□ 0.6
SKP2-201ENST00000274254 SLFN12LQ6IEE8 588 aa18.83■□□□□ 0.6
SKP2-201ENST00000274254 MPZL3Q6UWV2 235 aa18.83■□□□□ 0.6
SKP2-201ENST00000274254 TMEM199Q8N511 208 aa18.83■□□□□ 0.6
SKP2-201ENST00000274254 DPF3Q92784 378 aa18.83■□□□□ 0.6
SKP2-201ENST00000274254 CCDC51Q96ER9 411 aa18.83■□□□□ 0.6
SKP2-201ENST00000274254 BPIFA3Q9BQP9 254 aa18.83■□□□□ 0.6
SKP2-201ENST00000274254 HAPLN2Q9GZV7 340 aa18.83■□□□□ 0.6
SKP2-201ENST00000274254 LTBP2Q14767 1821 aa18.83■□□□□ 0.6
SKP2-201ENST00000274254 A0A0B4J269 797 aa18.82■□□□□ 0.6
SKP2-201ENST00000274254 CLDN3O15551 220 aa18.82■□□□□ 0.6
SKP2-201ENST00000274254 CALUO43852 315 aaPredicted RBP18.82■□□□□ 0.6
SKP2-201ENST00000274254 CAVIN2O95810 425 aa18.82■□□□□ 0.6
SKP2-201ENST00000274254 CSF2RAP15509 400 aa18.82■□□□□ 0.6
SKP2-201ENST00000274254 GARTP22102 1010 aa18.82■□□□□ 0.6
SKP2-201ENST00000274254 STX17P56962 302 aa18.82■□□□□ 0.6
SKP2-201ENST00000274254 TMEM132AQ24JP5 1023 aa18.82■□□□□ 0.6
SKP2-201ENST00000274254 CDR2LQ86X02 465 aaPredicted RBP18.82■□□□□ 0.6
SKP2-201ENST00000274254 SLC9A9Q8IVB4 645 aa18.82■□□□□ 0.6
SKP2-201ENST00000274254 DBF4BQ8NFT6 615 aa18.82■□□□□ 0.6
SKP2-201ENST00000274254 SEPT8Q92599 483 aa18.82■□□□□ 0.6
SKP2-201ENST00000274254 APBB2Q92870 758 aa18.82■□□□□ 0.6
SKP2-201ENST00000274254 DUSP9Q99956 384 aaKnown RBP18.82■□□□□ 0.6
SKP2-201ENST00000274254 CBWD1Q9BRT8 395 aa18.82■□□□□ 0.6
SKP2-201ENST00000274254 TRAIPQ9BWF2 469 aa18.82■□□□□ 0.6
SKP2-201ENST00000274254 NAT10Q9H0A0 1025 aaKnown RBP18.82■□□□□ 0.6
SKP2-201ENST00000274254 DMAC2Q9NW81 257 aa18.82■□□□□ 0.6
SKP2-201ENST00000274254 ANKFY1Q9P2R3 1169 aa18.82■□□□□ 0.6
SKP2-201ENST00000274254 CLIC2O15247 247 aa18.81■□□□□ 0.6
SKP2-201ENST00000274254 MGEA5O60502 916 aa18.81■□□□□ 0.6
SKP2-201ENST00000274254 ZNF165P49910 485 aa18.81■□□□□ 0.6
SKP2-201ENST00000274254 MYBPC2Q14324 1141 aa18.81■□□□□ 0.6
SKP2-201ENST00000274254 ZNF568Q3ZCX4 644 aa18.81■□□□□ 0.6
SKP2-201ENST00000274254 UBXN11Q5T124 520 aa18.81■□□□□ 0.6
SKP2-201ENST00000274254 ARMCX5Q6P1M9 558 aa18.81■□□□□ 0.6
SKP2-201ENST00000274254 SLC27A1Q6PCB7 646 aa18.81■□□□□ 0.6
SKP2-201ENST00000274254 DEFB128Q7Z7B8 93 aa18.81■□□□□ 0.6
SKP2-201ENST00000274254 ZC3H3Q8IXZ2 948 aaKnown RBP18.81■□□□□ 0.6
SKP2-201ENST00000274254 ENOX1Q8TC92 643 aaKnown RBP18.81■□□□□ 0.6
SKP2-201ENST00000274254 POMGNT1Q8WZA1 660 aa18.81■□□□□ 0.6
SKP2-201ENST00000274254 TSG101Q99816 390 aa18.81■□□□□ 0.6
SKP2-201ENST00000274254 FTHL17Q9BXU8 183 aa18.81■□□□□ 0.6
SKP2-201ENST00000274254 CDT1Q9H211 546 aa18.81■□□□□ 0.6
SKP2-201ENST00000274254 TSPY26PQ9H489 355 aa18.81■□□□□ 0.6
SKP2-201ENST00000274254 FAM189A1O60320 539 aa18.8■□□□□ 0.6
SKP2-201ENST00000274254 NR3C1P04150 777 aa18.8■□□□□ 0.6
SKP2-201ENST00000274254 PFKMP08237 780 aa18.8■□□□□ 0.6
SKP2-201ENST00000274254 ZSCAN20P17040 1043 aaPredicted RBP18.8■□□□□ 0.6
SKP2-201ENST00000274254 NOLC1Q14978 699 aaKnown RBP eCLIP18.8■□□□□ 0.6
SKP2-201ENST00000274254 TCTN1Q2MV58 587 aa18.8■□□□□ 0.6
SKP2-201ENST00000274254 LRRC55Q6ZSA7 311 aa18.8■□□□□ 0.6
SKP2-201ENST00000274254 BADQ92934 168 aa18.8■□□□□ 0.6
SKP2-201ENST00000274254 ADPGKQ9BRR6 497 aa18.8■□□□□ 0.6
SKP2-201ENST00000274254 TCHPQ9BT92 498 aa18.8■□□□□ 0.6
SKP2-201ENST00000274254 PCDH10Q9P2E7 1040 aa18.8■□□□□ 0.6
SKP2-201ENST00000274254 KIAA0391O15091 583 aaKnown RBP18.79■□□□□ 0.6
SKP2-201ENST00000274254 MCF2P10911 925 aa18.79■□□□□ 0.6
SKP2-201ENST00000274254 SYN1P17600 705 aa18.79■□□□□ 0.6
SKP2-201ENST00000274254 NR2F2P24468 414 aa18.79■□□□□ 0.6
SKP2-201ENST00000274254 FKBP3Q00688 224 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms