RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CRELD2Q6UXH1 353 aaPredicted RBP13.86□□□□□ -0.19
COL8A1-202ENST00000273342 ARHGEF19Q8IW93 802 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 ERMNQ8TAM6 284 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 ZSWIM1Q9BR11 485 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 APEX2Q9UBZ4 518 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 INTUQ9ULD6 942 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 TTC7AQ9ULT0 858 aaPredicted RBP13.86□□□□□ -0.19
COL8A1-202ENST00000273342 PPP1R12AO14974 1030 aaPredicted RBP13.86□□□□□ -0.19
COL8A1-202ENST00000273342 TOM1O60784 492 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 RARGP13631 454 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 SLC8A3P57103 927 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 SESN3P58005 492 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 KRT17Q04695 432 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 SPIRE1Q08AE8 756 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 BNIP1Q12981 228 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 THEMIS2Q5TEJ8 643 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 CYP4F22Q6NT55 531 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 VSIG1Q86XK7 387 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 ZSWIM2Q8NEG5 633 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 ARHGEF1Q92888 912 aaKnown RBP13.86□□□□□ -0.19
COL8A1-202ENST00000273342 HEMGNQ9BXL5 484 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 TAOK3Q9H2K8 898 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 PKD2L1Q9P0L9 805 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 HAO1Q9UJM8 370 aa13.86□□□□□ -0.19
COL8A1-202ENST00000273342 SPATA31A1Q5TZJ5 1347 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 THAP12O43422 761 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 CETPP11597 493 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 RPA1P27694 616 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 SMARCA1P28370 1054 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 GJC1P36383 396 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 ABL2P42684 1182 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 EPC2Q52LR7 807 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 SLC10A5Q5PT55 438 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 RINT1Q6NUQ1 792 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 RNF207Q6ZRF8 634 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 MAB21L3Q8N8X9 362 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 PARD3BQ8TEW8 1205 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 RPGRQ92834 1020 aaKnown RBP13.85□□□□□ -0.19
COL8A1-202ENST00000273342 EIF2AK1Q9BQI3 630 aaKnown RBP13.85□□□□□ -0.19
COL8A1-202ENST00000273342 SLC5A4Q9NY91 659 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 KLHL14Q9P2G3 628 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 FRMD4BQ9Y2L6 1034 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 PCNTO95613 3336 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 NCANO14594 1321 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 SYNGAP1Q96PV0 1343 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 GSTTP1A0A1W2PQM5 241 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 hCG_1984214I3L0E3 225 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 SGPL1O95470 568 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 CHRNB2P17787 502 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 CCND1P24385 295 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 DNAJC3Q13217 504 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 BIRC2Q13490 618 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 RIPK1Q13546 671 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 ZNF713Q8N859 430 aaPredicted RBP13.85□□□□□ -0.19
COL8A1-202ENST00000273342 FAM84AQ96KN4 292 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 DNAJC18Q9H819 358 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 CHST7Q9NS84 486 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
COL8A1-202ENST00000273342 ARL2BPQ9Y2Y0 163 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 RREB1Q92766 1687 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 MYO3BQ8WXR4 1341 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 PODXLO00592 558 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 MEIS2O14770 477 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 PIAS1O75925 651 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 ECEL1O95672 775 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 ERFP50548 548 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 RRP1BQ14684 758 aaKnown RBP13.85□□□□□ -0.19
COL8A1-202ENST00000273342 SLMAPQ14BN4 828 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 ODR4Q5SWX8 454 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 CGB2Q6NT52 195 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 ECHDC2Q86YB7 292 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 ARMC2Q8NEN0 867 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 TBC1D16Q8TBP0 767 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 ERP27Q96DN0 273 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 PCDHB18PQ96TA0 734 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 NYXQ9GZU5 481 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 STMN4Q9H169 189 aaPredicted RBP13.85□□□□□ -0.19
COL8A1-202ENST00000273342 SLCO1B3Q9NPD5 702 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 CNOT7Q9UIV1 285 aaKnown RBP13.85□□□□□ -0.19
COL8A1-202ENST00000273342 PCDHA3Q9Y5H8 950 aa13.85□□□□□ -0.19
COL8A1-202ENST00000273342 PASKQ96RG2 1323 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 MSH4O15457 936 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 GNPTABQ3T906 1256 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 SGO2Q562F6 1265 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 LLGL2Q6P1M3 1020 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 HS2ST1Q7LGA3 356 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 SLC13A5Q86YT5 568 aaPredicted RBP13.84□□□□□ -0.19
COL8A1-202ENST00000273342 FAM178BQ8IXR5 827 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 SLFN12Q8IYM2 578 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 ETNPPLQ8TBG4 499 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 DYDC2Q96IM9 177 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 IFT74Q96LB3 600 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 PITPNM3Q9BZ71 974 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 TRIM7Q9C029 511 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 AAASQ9NRG9 546 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 SERPINB13Q9UIV8 391 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 MTUS1Q9ULD2 1270 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 DAGLAQ9Y4D2 1042 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 ROBO1Q9Y6N7 1651 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 DDX39AO00148 427 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms