RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 PCDHB13Q9Y5F0 798 aa18.46■□□□□ 0.55
LRRC56-201ENST00000270115 A0A1B0GUL6 1792 aa18.46■□□□□ 0.54
LRRC56-201ENST00000270115 KLRK1P26718 216 aa18.45■□□□□ 0.54
LRRC56-201ENST00000270115 FAM84BQ96KN1 310 aaPredicted RBP18.45■□□□□ 0.54
LRRC56-201ENST00000270115 SLCO1B3Q9NPD5 702 aa18.45■□□□□ 0.54
LRRC56-201ENST00000270115 PCYOX1Q9UHG3 505 aa18.45■□□□□ 0.54
LRRC56-201ENST00000270115 LOC102724428A0A0B4J2F2 783 aa18.45■□□□□ 0.54
LRRC56-201ENST00000270115 T-ENOLP0DO92 83 aa18.45■□□□□ 0.54
LRRC56-201ENST00000270115 CETPP11597 493 aa18.45■□□□□ 0.54
LRRC56-201ENST00000270115 SIK1P57059 783 aa18.45■□□□□ 0.54
LRRC56-201ENST00000270115 CCDC15Q0P6D6 951 aa18.45■□□□□ 0.54
LRRC56-201ENST00000270115 KHDC1Q4VXA5 237 aaKnown RBP18.45■□□□□ 0.54
LRRC56-201ENST00000270115 RFWD3Q6PCD5 774 aa18.45■□□□□ 0.54
LRRC56-201ENST00000270115 FRMD5Q7Z6J6 570 aa18.45■□□□□ 0.54
LRRC56-201ENST00000270115 ZC3H18Q86VM9 953 aaKnown RBP18.45■□□□□ 0.54
LRRC56-201ENST00000270115 CCNJLQ8IV13 435 aa18.45■□□□□ 0.54
LRRC56-201ENST00000270115 ENDOVQ8N8Q3 282 aaKnown RBP18.45■□□□□ 0.54
LRRC56-201ENST00000270115 OLIG1Q8TAK6 271 aa18.45■□□□□ 0.54
LRRC56-201ENST00000270115 LRRC8CQ8TDW0 803 aa18.45■□□□□ 0.54
LRRC56-201ENST00000270115 FAM136AQ96C01 138 aa18.45■□□□□ 0.54
LRRC56-201ENST00000270115 ZNF333Q96JL9 665 aa18.45■□□□□ 0.54
LRRC56-201ENST00000270115 AAASQ9NRG9 546 aa18.45■□□□□ 0.54
LRRC56-201ENST00000270115 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.45■□□□□ 0.54
LRRC56-201ENST00000270115 NCANO14594 1321 aa18.45■□□□□ 0.54
LRRC56-201ENST00000270115 LRP5O75197 1615 aa18.44■□□□□ 0.54
LRRC56-201ENST00000270115 ATP5DP30049 168 aa18.44■□□□□ 0.54
LRRC56-201ENST00000270115 MKRN3Q13064 507 aaKnown RBP18.44■□□□□ 0.54
LRRC56-201ENST00000270115 TRIP13Q15645 432 aaPredicted RBP18.44■□□□□ 0.54
LRRC56-201ENST00000270115 SBK1Q52WX2 424 aa18.44■□□□□ 0.54
LRRC56-201ENST00000270115 ARHGEF18Q6ZSZ5 1173 aa18.44■□□□□ 0.54
LRRC56-201ENST00000270115 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.44■□□□□ 0.54
LRRC56-201ENST00000270115 CTTNBP2NLQ9P2B4 639 aa18.44■□□□□ 0.54
LRRC56-201ENST00000270115 RREB1Q92766 1687 aa18.44■□□□□ 0.54
LRRC56-201ENST00000270115 ATP9AO75110 1047 aa18.44■□□□□ 0.54
LRRC56-201ENST00000270115 SPAG7O75391 227 aa18.44■□□□□ 0.54
LRRC56-201ENST00000270115 LMNB1P20700 586 aa18.44■□□□□ 0.54
LRRC56-201ENST00000270115 COILP38432 576 aaPredicted RBP18.44■□□□□ 0.54
LRRC56-201ENST00000270115 UBE2SQ16763 222 aa18.44■□□□□ 0.54
LRRC56-201ENST00000270115 EDRF1Q3B7T1 1238 aa18.44■□□□□ 0.54
LRRC56-201ENST00000270115 RBM26Q5T8P6 1007 aaKnown RBP18.44■□□□□ 0.54
LRRC56-201ENST00000270115 TRMT10CQ7L0Y3 403 aaKnown RBP18.44■□□□□ 0.54
LRRC56-201ENST00000270115 PRUNE1Q86TP1 453 aa18.44■□□□□ 0.54
LRRC56-201ENST00000270115 CPNE8Q86YQ8 564 aa18.44■□□□□ 0.54
LRRC56-201ENST00000270115 RBM41Q96IZ5 413 aaKnown RBP18.44■□□□□ 0.54
LRRC56-201ENST00000270115 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.44■□□□□ 0.54
LRRC56-201ENST00000270115 LMCD1Q9NZU5 365 aa18.44■□□□□ 0.54
LRRC56-201ENST00000270115 PYGMP11217 842 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 TNFAIP3P21580 790 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 CTNNA2P26232 953 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 ACVR2BQ13705 512 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 DRAP1Q14919 205 aaPredicted RBP18.43■□□□□ 0.54
LRRC56-201ENST00000270115 ZC2HC1CQ53FD0 456 aaPredicted RBP18.43■□□□□ 0.54
LRRC56-201ENST00000270115 C12orf60Q5U649 245 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 IRGCQ6NXR0 463 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 CDCA7Q9BWT1 371 aaPredicted RBP18.43■□□□□ 0.54
LRRC56-201ENST00000270115 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.43■□□□□ 0.54
LRRC56-201ENST00000270115 CCDC87Q9NVE4 849 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 TFCP2L1Q9NZI6 479 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 SYNGAP1Q96PV0 1343 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 SLIT2O94813 1529 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 ERVV-1B6SEH8 477 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 MAPK13O15264 365 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 ATP5HO75947 161 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 TTLL1O95922 423 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 CYP11B2P19099 503 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 KCNA3P22001 575 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 SOX5P35711 763 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 CACNA2D1P54289 1103 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 STRN3Q13033 797 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 MESDQ14696 234 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 ARHGAP44Q17R89 818 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 BICDL1Q6ZP65 573 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 HAS1Q92839 578 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 SPZ1Q9BXG8 430 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 UBE2OQ9C0C9 1292 aaKnown RBP18.43■□□□□ 0.54
LRRC56-201ENST00000270115 IKZF4Q9H2S9 585 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 BCAS3Q9H6U6 928 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 PHTF1Q9UMS5 762 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 PCDHA12Q9UN75 941 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 PASKQ96RG2 1323 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 DOT1LQ8TEK3 1739 aa18.43■□□□□ 0.54
LRRC56-201ENST00000270115 LRRC23Q53EV4 343 aaPredicted RBP18.42■□□□□ 0.54
LRRC56-201ENST00000270115 SNX30Q5VWJ9 437 aa18.42■□□□□ 0.54
LRRC56-201ENST00000270115 UBL4BQ8N7F7 174 aa18.42■□□□□ 0.54
LRRC56-201ENST00000270115 SCG3Q8WXD2 468 aaKnown RBP18.42■□□□□ 0.54
LRRC56-201ENST00000270115 SLC35C1Q96A29 364 aa18.42■□□□□ 0.54
LRRC56-201ENST00000270115 FAM210AQ96ND0 272 aa18.42■□□□□ 0.54
LRRC56-201ENST00000270115 DDX50Q9BQ39 737 aaKnown RBP18.42■□□□□ 0.54
LRRC56-201ENST00000270115 DDX25Q9UHL0 483 aaKnown RBP18.42■□□□□ 0.54
LRRC56-201ENST00000270115 SAP30BPQ9UHR5 308 aaKnown RBP18.42■□□□□ 0.54
LRRC56-201ENST00000270115 NRAPQ86VF7 1730 aa18.42■□□□□ 0.54
LRRC56-201ENST00000270115 PYGBP11216 843 aa18.42■□□□□ 0.54
LRRC56-201ENST00000270115 ANXA13P27216 316 aa18.42■□□□□ 0.54
LRRC56-201ENST00000270115 HOXD13P35453 343 aa18.42■□□□□ 0.54
LRRC56-201ENST00000270115 SERPINB4P48594 390 aa18.42■□□□□ 0.54
LRRC56-201ENST00000270115 SEL1L2Q5TEA6 688 aa18.42■□□□□ 0.54
LRRC56-201ENST00000270115 NBPF5PQ86XG9 351 aaPredicted RBP18.42■□□□□ 0.54
LRRC56-201ENST00000270115 APLFQ8IW19 511 aaPredicted RBP18.42■□□□□ 0.54
LRRC56-201ENST00000270115 ZC3H3Q8IXZ2 948 aaKnown RBP18.42■□□□□ 0.54
LRRC56-201ENST00000270115 DTX3LQ8TDB6 740 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms