RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 EIF3BP55884 814 aaKnown RBP23.84■■□□□ 1.41
CDR2-201ENST00000268383 DHX34Q14147 1143 aaKnown RBP23.84■■□□□ 1.41
CDR2-201ENST00000268383 AOC3Q16853 763 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 OTUD6AQ7L8S5 288 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 HOOK3Q86VS8 718 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 RHOT2Q8IXI1 618 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 LRRC34Q8IZ02 419 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 IL31RAQ8NI17 732 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 WDR11Q9BZH6 1224 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 SEL1LQ9UBV2 794 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 GGA2Q9UJY4 613 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 TRPC6Q9Y210 931 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 DIS3Q9Y2L1 958 aaKnown RBP23.84■■□□□ 1.41
CDR2-201ENST00000268383 ITGB5P18084 799 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 STRIP1Q5VSL9 837 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 STXBP4Q6ZWJ1 553 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 UBL4BQ8N7F7 174 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 ATXN2LQ8WWM7 1075 aaKnown RBP23.84■■□□□ 1.41
CDR2-201ENST00000268383 CCDC127Q96BQ5 260 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 STRA6Q9BX79 667 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 ODF2LQ9ULJ1 636 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 PCDHA3Q9Y5H8 950 aa23.84■■□□□ 1.41
CDR2-201ENST00000268383 NUDT17P0C025 328 aa23.83■■□□□ 1.41
CDR2-201ENST00000268383 SNX1Q13596 522 aa23.83■■□□□ 1.41
CDR2-201ENST00000268383 HVCN1Q96D96 273 aa23.83■■□□□ 1.41
CDR2-201ENST00000268383 KREMEN1Q96MU8 473 aa23.83■■□□□ 1.41
CDR2-201ENST00000268383 ZNF317Q96PQ6 595 aaPredicted RBP23.83■■□□□ 1.41
CDR2-201ENST00000268383 DDX23Q9BUQ8 820 aaKnown RBP23.83■■□□□ 1.41
CDR2-201ENST00000268383 TEKT3Q9BXF9 490 aa23.83■■□□□ 1.41
CDR2-201ENST00000268383 SLX4Q8IY92 1834 aa23.83■■□□□ 1.41
CDR2-201ENST00000268383 RARAP10276 462 aa23.83■■□□□ 1.41
CDR2-201ENST00000268383 CREB1P16220 341 aa23.83■■□□□ 1.41
CDR2-201ENST00000268383 ALDH1B1P30837 517 aa23.83■■□□□ 1.41
CDR2-201ENST00000268383 LRRC14Q15048 493 aa23.83■■□□□ 1.41
CDR2-201ENST00000268383 EPC2Q52LR7 807 aa23.83■■□□□ 1.41
CDR2-201ENST00000268383 MGARPQ8TDB4 240 aa23.83■■□□□ 1.41
CDR2-201ENST00000268383 EPS8L1Q8TE68 723 aa23.83■■□□□ 1.41
CDR2-201ENST00000268383 SEMA4DQ92854 862 aa23.83■■□□□ 1.41
CDR2-201ENST00000268383 ZKSCAN4Q969J2 545 aaPredicted RBP23.83■■□□□ 1.41
CDR2-201ENST00000268383 NUP85Q9BW27 656 aa23.83■■□□□ 1.41
CDR2-201ENST00000268383 MLXIPLQ9NP71 852 aa23.83■■□□□ 1.41
CDR2-201ENST00000268383 RASAL2Q9UJF2 1139 aa23.83■■□□□ 1.41
CDR2-201ENST00000268383 SYNGAP1Q96PV0 1343 aa23.83■■□□□ 1.4
CDR2-201ENST00000268383 SPOPO43791 374 aa23.83■■□□□ 1.4
CDR2-201ENST00000268383 ADRB2P07550 413 aa23.83■■□□□ 1.4
CDR2-201ENST00000268383 VIL1P09327 827 aaKnown RBP23.83■■□□□ 1.4
CDR2-201ENST00000268383 DLATP10515 647 aaKnown RBP23.83■■□□□ 1.4
CDR2-201ENST00000268383 IRX3P78415 501 aaPredicted RBP23.83■■□□□ 1.4
CDR2-201ENST00000268383 FUKQ8N0W3 1084 aa23.83■■□□□ 1.4
CDR2-201ENST00000268383 C1orf54Q8WWF1 131 aa23.83■■□□□ 1.4
CDR2-201ENST00000268383 CCT6BQ92526 530 aa23.83■■□□□ 1.4
CDR2-201ENST00000268383 SAAL1Q96ER3 474 aa23.83■■□□□ 1.4
CDR2-201ENST00000268383 KIFC3Q9BVG8 833 aa23.83■■□□□ 1.4
CDR2-201ENST00000268383 TMEM117Q9H0C3 514 aa23.83■■□□□ 1.4
CDR2-201ENST00000268383 HSPBP1Q9NZL4 362 aa23.83■■□□□ 1.4
CDR2-201ENST00000268383 MMP10P09238 476 aa23.82■■□□□ 1.4
CDR2-201ENST00000268383 DHX38Q92620 1227 aaKnown RBP23.82■■□□□ 1.4
CDR2-201ENST00000268383 ELAC2Q9BQ52 826 aaKnown RBP23.82■■□□□ 1.4
CDR2-201ENST00000268383 TOPORSQ9NS56 1045 aaPredicted RBP23.82■■□□□ 1.4
CDR2-201ENST00000268383 SCAF8Q9UPN6 1271 aaKnown RBP23.82■■□□□ 1.4
CDR2-201ENST00000268383 SLC16A4O15374 487 aa23.82■■□□□ 1.4
CDR2-201ENST00000268383 CTNNA2P26232 953 aa23.82■■□□□ 1.4
CDR2-201ENST00000268383 CHRNA3P32297 505 aa23.82■■□□□ 1.4
CDR2-201ENST00000268383 MMP13P45452 471 aa23.82■■□□□ 1.4
CDR2-201ENST00000268383 TRIP13Q15645 432 aaPredicted RBP23.82■■□□□ 1.4
CDR2-201ENST00000268383 C2CD6Q53TS8 623 aa23.82■■□□□ 1.4
CDR2-201ENST00000268383 SEL1L2Q5TEA6 688 aa23.82■■□□□ 1.4
CDR2-201ENST00000268383 DAB2IPQ5VWQ8 1189 aa23.82■■□□□ 1.4
CDR2-201ENST00000268383 CYB5D1Q6P9G0 228 aa23.82■■□□□ 1.4
CDR2-201ENST00000268383 FAM228AQ86W67 206 aa23.82■■□□□ 1.4
CDR2-201ENST00000268383 AGBL1Q96MI9 1066 aa23.82■■□□□ 1.4
CDR2-201ENST00000268383 COL20A1Q9P218 1284 aa23.82■■□□□ 1.4
CDR2-201ENST00000268383 SETQ01105 290 aaPredicted RBP23.81■■□□□ 1.4
CDR2-201ENST00000268383 LONRF1Q17RB8 773 aa23.81■■□□□ 1.4
CDR2-201ENST00000268383 MIGA2Q7L4E1 593 aa23.81■■□□□ 1.4
CDR2-201ENST00000268383 MIER3Q7Z3K6 550 aa23.81■■□□□ 1.4
CDR2-201ENST00000268383 COL23A1Q86Y22 540 aaPredicted RBP23.81■■□□□ 1.4
CDR2-201ENST00000268383 CBWD2Q8IUF1 395 aa23.81■■□□□ 1.4
CDR2-201ENST00000268383 DHX37Q8IY37 1157 aaKnown RBP23.81■■□□□ 1.4
CDR2-201ENST00000268383 TRIM7Q9C029 511 aa23.81■■□□□ 1.4
CDR2-201ENST00000268383 CNOT10Q9H9A5 744 aaKnown RBP23.81■■□□□ 1.4
CDR2-201ENST00000268383 CLDN3O15551 220 aa23.81■■□□□ 1.4
CDR2-201ENST00000268383 ACSL3O95573 720 aa23.81■■□□□ 1.4
CDR2-201ENST00000268383 C11orf63Q6NUN7 778 aa23.81■■□□□ 1.4
CDR2-201ENST00000268383 LLGL2Q6P1M3 1020 aa23.81■■□□□ 1.4
CDR2-201ENST00000268383 INTS8Q75QN2 995 aaKnown RBP23.81■■□□□ 1.4
CDR2-201ENST00000268383 ZNF564Q8TBZ8 553 aaPredicted RBP23.81■■□□□ 1.4
CDR2-201ENST00000268383 SCLT1Q96NL6 688 aa23.81■■□□□ 1.4
CDR2-201ENST00000268383 INTS9Q9NV88 658 aaKnown RBP23.81■■□□□ 1.4
CDR2-201ENST00000268383 NOCTQ9UK39 431 aaKnown RBP23.81■■□□□ 1.4
CDR2-201ENST00000268383 ZHX2Q9Y6X8 837 aa23.81■■□□□ 1.4
CDR2-201ENST00000268383 CCDC169A6NNP5 214 aa23.8■■□□□ 1.4
CDR2-201ENST00000268383 RIPK2O43353 540 aa23.8■■□□□ 1.4
CDR2-201ENST00000268383 RTN2O75298 545 aa23.8■■□□□ 1.4
CDR2-201ENST00000268383 VIMP08670 466 aaKnown RBP23.8■■□□□ 1.4
CDR2-201ENST00000268383 COILP38432 576 aaPredicted RBP23.8■■□□□ 1.4
CDR2-201ENST00000268383 SPP2Q13103 211 aa23.8■■□□□ 1.4
CDR2-201ENST00000268383 MEX3CQ5U5Q3 659 aaKnown RBP23.8■■□□□ 1.4
CDR2-201ENST00000268383 SLC9A9Q8IVB4 645 aa23.8■■□□□ 1.4
CDR2-201ENST00000268383 ATG4AQ8WYN0 398 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms