RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 WDR64B1ANS9 1081 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 RPS6KA5O75582 802 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 IVLP07476 585 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 HSPA8P11142 646 aaKnown RBP13.95□□□□□ -0.18
CPSF6-201ENST00000266679 PSMC5P62195 406 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 GTF2BQ00403 316 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 CETN1Q12798 172 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 TNFAIP1Q13829 316 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 DNAJC21Q5F1R6 531 aaKnown RBP13.95□□□□□ -0.18
CPSF6-201ENST00000266679 DDX42Q86XP3 938 aaKnown RBP eCLIP13.95□□□□□ -0.18
CPSF6-201ENST00000266679 RASGEF1CQ8N431 466 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 WHAMMQ8TF30 809 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 KAT5Q92993 513 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 PHIPQ8WWQ0 1821 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 CCDC169A6NNP5 214 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 DDX3YO15523 660 aaKnown RBP13.94□□□□□ -0.18
CPSF6-201ENST00000266679 CTNND1O60716 968 aaKnown RBP13.94□□□□□ -0.18
CPSF6-201ENST00000266679 CTCFP49711 727 aaPredicted RBP13.94□□□□□ -0.18
CPSF6-201ENST00000266679 MXI1P50539 228 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 JAK3P52333 1124 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 NCKAP1LP55160 1127 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 NAA35Q5VZE5 725 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 ZNF746Q6NUN9 644 aaPredicted RBP13.94□□□□□ -0.18
CPSF6-201ENST00000266679 MOB2Q70IA6 237 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 C4orf19Q8IY42 314 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 RPUSD2Q8IZ73 545 aaKnown RBP13.94□□□□□ -0.18
CPSF6-201ENST00000266679 SAAL1Q96ER3 474 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 ISCUQ9H1K1 167 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 RNF146Q9NTX7 359 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 ANKRD63C9JTQ0 380 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 SART1O43290 800 aaKnown RBP13.94□□□□□ -0.18
CPSF6-201ENST00000266679 KRT14P02533 472 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 PPATQ06203 517 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 PRPF4BQ13523 1007 aaKnown RBP13.94□□□□□ -0.18
CPSF6-201ENST00000266679 MREGQ8N565 214 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 SH2D3CQ8N5H7 860 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 PIK3R5Q8WYR1 880 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 COG5Q9UP83 839 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 RIPK3Q9Y572 518 aa13.94□□□□□ -0.18
CPSF6-201ENST00000266679 ZNFX1Q9P2E3 1918 aaKnown RBP13.93□□□□□ -0.18
CPSF6-201ENST00000266679 ANKRD62A6NC57 917 aa13.93□□□□□ -0.18
CPSF6-201ENST00000266679 CCDC188H7C350 402 aa13.93□□□□□ -0.18
CPSF6-201ENST00000266679 FGGP02679 453 aa13.93□□□□□ -0.18
CPSF6-201ENST00000266679 ECHS1P30084 290 aa13.93□□□□□ -0.18
CPSF6-201ENST00000266679 SOX10P56693 466 aa13.93□□□□□ -0.18
CPSF6-201ENST00000266679 KRT76Q01546 638 aa13.93□□□□□ -0.18
CPSF6-201ENST00000266679 MAP2K1Q02750 393 aaPredicted RBP13.93□□□□□ -0.18
CPSF6-201ENST00000266679 BAATQ14032 418 aaPredicted RBP13.93□□□□□ -0.18
CPSF6-201ENST00000266679 DCAF12L1Q5VU92 463 aa13.93□□□□□ -0.18
CPSF6-201ENST00000266679 CBWD2Q8IUF1 395 aa13.93□□□□□ -0.18
CPSF6-201ENST00000266679 TIPINQ9BVW5 301 aa13.93□□□□□ -0.18
CPSF6-201ENST00000266679 TMEM117Q9H0C3 514 aa13.93□□□□□ -0.18
CPSF6-201ENST00000266679 ST6GALNAC4Q9H4F1 302 aa13.93□□□□□ -0.18
CPSF6-201ENST00000266679 MAP3K20Q9NYL2 800 aaKnown RBP13.93□□□□□ -0.18
CPSF6-201ENST00000266679 AMACRQ9UHK6 382 aa13.93□□□□□ -0.18
CPSF6-201ENST00000266679 ZNF233A6NK53 670 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 TMEM110-MUSTN1A8MSY1 372 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 VWA5AO00534 786 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 P4HA2O15460 535 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 SHOX2O60902 331 aaPredicted RBP13.92□□□□□ -0.18
CPSF6-201ENST00000266679 SGPL1O95470 568 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 SFNP31947 248 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 NBPF12Q5TAG4 269 aaPredicted RBP13.92□□□□□ -0.18
CPSF6-201ENST00000266679 KCTD16Q68DU8 428 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 ADAT2Q7Z6V5 191 aaKnown RBP13.92□□□□□ -0.18
CPSF6-201ENST00000266679 IQCKQ8N0W5 287 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 CCDC127Q96BQ5 260 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 CELF4Q9BZC1 486 aaKnown RBP13.92□□□□□ -0.18
CPSF6-201ENST00000266679 NEUROG2Q9H2A3 272 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 ANKEF1Q9NU02 776 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 PAPPA2Q9BXP8 1791 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 TTI1O43156 1089 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 SORBS3O60504 671 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 FTLP02792 175 aaPredicted RBP13.92□□□□□ -0.18
CPSF6-201ENST00000266679 CCND2P30279 289 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 HSPA9P38646 679 aaKnown RBP13.92□□□□□ -0.18
CPSF6-201ENST00000266679 ZNF211Q13398 564 aaPredicted RBP13.92□□□□□ -0.18
CPSF6-201ENST00000266679 CUL1Q13616 776 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 TTC19Q6DKK2 380 aaPredicted RBP13.92□□□□□ -0.18
CPSF6-201ENST00000266679 MAATS1Q7Z4T9 603 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 C2orf69Q8N8R5 385 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 BSNDQ8WZ55 320 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 IWS1Q96ST2 819 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 TOPORSQ9NS56 1045 aaPredicted RBP13.92□□□□□ -0.18
CPSF6-201ENST00000266679 CTTNBP2NLQ9P2B4 639 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 TBX20Q9UMR3 447 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 EXOC7Q9UPT5 735 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 PLAAQ9Y263 795 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 RLFQ13129 1914 aa13.92□□□□□ -0.18
CPSF6-201ENST00000266679 NPTX2P47972 431 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 GNGT1P63211 74 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 SP4Q02446 784 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 DMP1Q13316 513 aaPredicted RBP13.91□□□□□ -0.18
CPSF6-201ENST00000266679 SNRNP35Q16560 246 aaKnown RBP13.91□□□□□ -0.18
CPSF6-201ENST00000266679 SNRNP48Q6IEG0 339 aaKnown RBP13.91□□□□□ -0.18
CPSF6-201ENST00000266679 ANO5Q75V66 913 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 NOP9Q86U38 636 aaKnown RBP13.91□□□□□ -0.18
CPSF6-201ENST00000266679 NLRX1Q86UT6 975 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 PPM1KQ8N3J5 372 aa13.91□□□□□ -0.18
CPSF6-201ENST00000266679 SAMD3Q8N6K7 520 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms