RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 SETDB1Q15047 1291 aa21.25■□□□□ 0.99
CSPG5-201ENST00000264723 ZNF564Q8TBZ8 553 aaPredicted RBP21.25■□□□□ 0.99
CSPG5-201ENST00000264723 TMEM143Q96AN5 459 aa21.25■□□□□ 0.99
CSPG5-201ENST00000264723 RNF25Q96BH1 459 aaPredicted RBP21.25■□□□□ 0.99
CSPG5-201ENST00000264723 C18orf8Q96DM3 657 aa21.25■□□□□ 0.99
CSPG5-201ENST00000264723 EFCC1Q9HA90 598 aa21.25■□□□□ 0.99
CSPG5-201ENST00000264723 DDX3XO00571 662 aaKnown RBP eCLIP21.25■□□□□ 0.99
CSPG5-201ENST00000264723 CLDN3O15551 220 aa21.25■□□□□ 0.99
CSPG5-201ENST00000264723 SLC29A2Q14542 456 aa21.25■□□□□ 0.99
CSPG5-201ENST00000264723 ANAPC5Q9UJX4 755 aa21.25■□□□□ 0.99
CSPG5-201ENST00000264723 TMED2Q15363 201 aa21.25■□□□□ 0.99
CSPG5-201ENST00000264723 RHOT2Q8IXI1 618 aa21.25■□□□□ 0.99
CSPG5-201ENST00000264723 PPP1R14CQ8TAE6 165 aa21.25■□□□□ 0.99
CSPG5-201ENST00000264723 MYCBPAPQ8TBZ2 947 aa21.25■□□□□ 0.99
CSPG5-201ENST00000264723 GAKO14976 1311 aa21.25■□□□□ 0.99
CSPG5-201ENST00000264723 TBX3O15119 743 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 COMTP21964 271 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 SNCBQ16143 134 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 SRRM1Q8IYB3 904 aaKnown RBP21.24■□□□□ 0.99
CSPG5-201ENST00000264723 RWDD2BP57060 319 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 CCDC6Q16204 474 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 SPATS2Q86XZ4 545 aaKnown RBP21.24■□□□□ 0.99
CSPG5-201ENST00000264723 FBXO25Q8TCJ0 367 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 CYFIP2Q96F07 1278 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 POP1Q99575 1024 aaKnown RBP21.24■□□□□ 0.99
CSPG5-201ENST00000264723 C11orf70Q9BRQ4 267 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 CBWD1Q9BRT8 395 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 TUFT1Q9NNX1 390 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 ACOT2P49753 483 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 BFSP1Q12934 665 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 LONRF1Q17RB8 773 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 KIAA1755Q5JYT7 1200 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 AGPAT3Q9NRZ7 376 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 SEL1LQ9UBV2 794 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 NOD1Q9Y239 953 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 WDR46O15213 610 aaKnown RBP21.24■□□□□ 0.99
CSPG5-201ENST00000264723 PPP1R21Q6ZMI0 780 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 SYN2Q92777 582 aaPredicted RBP21.24■□□□□ 0.99
CSPG5-201ENST00000264723 SLC35C1Q96A29 364 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 MXRA8Q9BRK3 442 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 ACAD9Q9H845 621 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 HAUS2Q9NVX0 235 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 HACL1Q9UJ83 578 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 USP20Q9Y2K6 914 aa21.24■□□□□ 0.99
CSPG5-201ENST00000264723 ZNF131P52739 623 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 CRY2Q49AN0 593 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 NBPF12Q5TAG4 269 aaPredicted RBP21.23■□□□□ 0.99
CSPG5-201ENST00000264723 HHATQ5VTY9 493 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 BSPRYQ5W0U4 402 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 HGSNATQ68CP4 663 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 JAMLQ86YT9 394 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 FAM49AQ9H0Q0 323 aaPredicted RBP21.23■□□□□ 0.99
CSPG5-201ENST00000264723 SLITRK6Q9H5Y7 841 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 TAS2R14Q9NYV8 317 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 NID2Q14112 1375 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 GOLGA8MH3BSY2 632 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 CALCAP01258 141 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 CHN1P15882 459 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 IREB2P48200 963 aaKnown RBP21.23■□□□□ 0.99
CSPG5-201ENST00000264723 ADPGKQ9BRR6 497 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 PITPNM2Q9BZ72 1349 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 ARSHQ5FYA8 562 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 ZNF280CQ8ND82 737 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 MCPH1Q8NEM0 835 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 HVCN1Q96D96 273 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 FAM84AQ96KN4 292 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 PRMT1Q99873 361 aaKnown RBP21.23■□□□□ 0.99
CSPG5-201ENST00000264723 ATP6V0A4Q9HBG4 840 aa21.23■□□□□ 0.99
CSPG5-201ENST00000264723 SYNJ2BP-COX16A0A087WUM0 186 aa21.22■□□□□ 0.99
CSPG5-201ENST00000264723 NOL4O94818 638 aa21.22■□□□□ 0.99
CSPG5-201ENST00000264723 HNRNPH1P31943 449 aaKnown RBP21.22■□□□□ 0.99
CSPG5-201ENST00000264723 TMEM270Q6UE05 265 aa21.22■□□□□ 0.99
CSPG5-201ENST00000264723 CPA5Q8WXQ8 436 aa21.22■□□□□ 0.99
CSPG5-201ENST00000264723 GLIS2Q9BZE0 524 aaPredicted RBP21.22■□□□□ 0.99
CSPG5-201ENST00000264723 UNC45AQ9H3U1 944 aa21.22■□□□□ 0.99
CSPG5-201ENST00000264723 AIPL1Q9NZN9 384 aa21.22■□□□□ 0.99
CSPG5-201ENST00000264723 COX16Q9P0S2 106 aa21.22■□□□□ 0.99
CSPG5-201ENST00000264723 BAZ2AQ9UIF9 1905 aaKnown RBP21.22■□□□□ 0.99
CSPG5-201ENST00000264723 SCN11AQ9UI33 1791 aa21.22■□□□□ 0.99
CSPG5-201ENST00000264723 CAND2O75155 1236 aa21.22■□□□□ 0.99
CSPG5-201ENST00000264723 CNGA1P29973 690 aa21.22■□□□□ 0.99
CSPG5-201ENST00000264723 LBHD1Q9BQE6 289 aaPredicted RBP21.22■□□□□ 0.99
CSPG5-201ENST00000264723 POLR3FQ9H1D9 316 aaPredicted RBP21.22■□□□□ 0.99
CSPG5-201ENST00000264723 PI4K2BG5E9Z4 385 aa21.22■□□□□ 0.99
CSPG5-201ENST00000264723 ATP5DP30049 168 aa21.22■□□□□ 0.99
CSPG5-201ENST00000264723 C7orf31Q8N865 590 aa21.22■□□□□ 0.99
CSPG5-201ENST00000264723 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.22■□□□□ 0.99
CSPG5-201ENST00000264723 ELP3Q9H9T3 547 aa21.22■□□□□ 0.99
CSPG5-201ENST00000264723 RAB20Q9NX57 234 aa21.22■□□□□ 0.99
CSPG5-201ENST00000264723 TMX2Q9Y320 296 aa21.22■□□□□ 0.99
CSPG5-201ENST00000264723 SREBF1P36956 1147 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 PPP2R5DQ14738 602 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 CBWD6Q4V339 395 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 CBWD3Q5JTY5 395 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 CBWD5Q5RIA9 395 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 KLHL29Q96CT2 875 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 ARHGEF26Q96DR7 871 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 SLC10A4Q96EP9 437 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 DISP2A7MBM2 1401 aa21.21■□□□□ 0.99
CSPG5-201ENST00000264723 GUCY2CP25092 1073 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms