RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 DEPDC1BQ8WUY9 529 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 KIF12Q96FN5 646 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 SUCLA2Q9P2R7 463 aaPredicted RBP14.91□□□□□ -0.02
CDH3-201ENST00000264012 SNX12Q9UMY4 172 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 GGCXP38435 758 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 PLA2G4FQ68DD2 849 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 RAD9BQ6WBX8 426 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 RTFDC1Q9BY42 306 aaPredicted RBP14.91□□□□□ -0.02
CDH3-201ENST00000264012 ADAM21Q9UKJ8 722 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 FNDC3AQ9Y2H6 1198 aaKnown RBP14.91□□□□□ -0.02
CDH3-201ENST00000264012 DEPDC5O75140 1603 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 SLC37A4O43826 429 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 TOM1L1O75674 476 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 XPAP23025 273 aaPredicted RBP14.91□□□□□ -0.02
CDH3-201ENST00000264012 CAV1Q03135 178 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 SNRNP35Q16560 246 aaKnown RBP14.91□□□□□ -0.02
CDH3-201ENST00000264012 COL23A1Q86Y22 540 aaPredicted RBP14.91□□□□□ -0.02
CDH3-201ENST00000264012 PRMT6Q96LA8 375 aaPredicted RBP14.91□□□□□ -0.02
CDH3-201ENST00000264012 SLITRK6Q9H5Y7 841 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 KCNH7Q9NS40 1196 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 ARHGEF28Q8N1W1 1705 aaKnown RBP14.91□□□□□ -0.02
CDH3-201ENST00000264012 GYPCP04921 128 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 IRX4P78413 519 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 PDCLQ13371 301 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 MMEL1Q495T6 779 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 CATSPER3Q86XQ3 398 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 ATG4CQ96DT6 458 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 TRIM56Q9BRZ2 755 aaKnown RBP14.9□□□□□ -0.02
CDH3-201ENST00000264012 TAF1DQ9H5J8 278 aaPredicted RBP14.9□□□□□ -0.02
CDH3-201ENST00000264012 FBXO28Q9NVF7 368 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 A8MXQ7 604 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 RTN2O75298 545 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 TADA3O75528 432 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 KRT37O76014 449 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 RPS12P25398 132 aaKnown RBP14.9□□□□□ -0.02
CDH3-201ENST00000264012 ELF1P32519 619 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 WDR72Q3MJ13 1102 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 SH2D4BQ5SQS7 431 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 FAM102AQ5T9C2 384 aaPredicted RBP14.9□□□□□ -0.02
CDH3-201ENST00000264012 RAB44Q7Z6P3 723 aaPredicted RBP14.9□□□□□ -0.02
CDH3-201ENST00000264012 SCN4BQ8IWT1 228 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 SCYL3Q8IZE3 742 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 KLHL8Q9P2G9 620 aaPredicted RBP14.9□□□□□ -0.02
CDH3-201ENST00000264012 NWD1Q149M9 1564 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 SLC8A1P32418 973 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 SESN3P58005 492 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 RBBP5Q15291 538 aaKnown RBP14.9□□□□□ -0.02
CDH3-201ENST00000264012 KLHL29Q96CT2 875 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 RNPC3Q96LT9 517 aaKnown RBP14.9□□□□□ -0.02
CDH3-201ENST00000264012 ZDHHC15Q96MV8 337 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 FHOD1Q9Y613 1164 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 CSPG5O95196 566 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 SLC9A1P19634 815 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 SCP2P22307 547 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 KPNA2P52292 529 aaKnown RBP14.9□□□□□ -0.02
CDH3-201ENST00000264012 PRKCEQ02156 737 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 NUGGCQ68CJ6 796 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 CCDC137Q6PK04 289 aaKnown RBP14.9□□□□□ -0.02
CDH3-201ENST00000264012 KCTD17Q8N5Z5 321 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 NUDCD1Q96RS6 583 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 STAP1Q9ULZ2 295 aa14.9□□□□□ -0.02
CDH3-201ENST00000264012 KIF20BQ96Q89 1820 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 FAM187AA6NFU0 413 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 SSTR3P32745 418 aaPredicted RBP14.89□□□□□ -0.03
CDH3-201ENST00000264012 TOB1P50616 345 aaPredicted RBP14.89□□□□□ -0.03
CDH3-201ENST00000264012 GALCP54803 685 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 TSPY1Q01534 308 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 MXD4Q14582 209 aaPredicted RBP14.89□□□□□ -0.03
CDH3-201ENST00000264012 SPOPLQ6IQ16 392 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 ACER1Q8TDN7 264 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 GOLGA8MH3BSY2 632 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 EMC2Q15006 297 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 SLC16A10Q8TF71 515 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 MOV10L1Q9BXT6 1211 aaKnown RBP14.89□□□□□ -0.03
CDH3-201ENST00000264012 PARVAQ9NVD7 372 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 TCRBV5S4A2TA0A5A2 114 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 MAFGO15525 162 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 S100BP04271 92 aaPredicted RBP14.89□□□□□ -0.03
CDH3-201ENST00000264012 PMS2P54278 862 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 RPS6P62753 249 aaKnown RBP14.89□□□□□ -0.03
CDH3-201ENST00000264012 AGXT2Q9BYV1 514 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 CPSF2Q9P2I0 782 aaKnown RBP14.89□□□□□ -0.03
CDH3-201ENST00000264012 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.89□□□□□ -0.03
CDH3-201ENST00000264012 EIF3DO15371 548 aaKnown RBP eCLIP14.89□□□□□ -0.03
CDH3-201ENST00000264012 NTRK3Q16288 839 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 KYAT1Q16773 422 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 C3orf67Q6ZVT6 689 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 ACAP3Q96P50 834 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 SMARCAD1Q9H4L7 1026 aa14.89□□□□□ -0.03
CDH3-201ENST00000264012 TNS2Q63HR2 1409 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 RASA4BC9J798 803 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 MSH4O15457 936 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 RASA4O43374 803 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 ADORA2BP29275 332 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 FAM133BQ5BKY9 247 aaKnown RBP14.88□□□□□ -0.03
CDH3-201ENST00000264012 C1orf54Q8WWF1 131 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 POLR3CQ9BUI4 534 aaPredicted RBP14.88□□□□□ -0.03
CDH3-201ENST00000264012 CYP26B1Q9NR63 512 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 AMACRQ9UHK6 382 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 CASQ2O14958 399 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms