RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 EARS2Q5JPH6 523 aaKnown RBP13.6□□□□□ -0.23
TRAF4-202ENST00000262396 AGMOQ6ZNB7 445 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 CCDC149Q6ZUS6 474 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 MRPL10Q7Z7H8 261 aaKnown RBP13.6□□□□□ -0.23
TRAF4-202ENST00000262396 UBALD2Q8IYN6 164 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 FAM184AQ8NB25 1140 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 PIGOQ8TEQ8 1089 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 COLEC11Q9BWP8 271 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 CSRNP2Q9H175 543 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 IRF2BPLQ9H1B7 796 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 POLR3FQ9H1D9 316 aaPredicted RBP13.6□□□□□ -0.23
TRAF4-202ENST00000262396 MINDY3Q9H8M7 445 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 CDH22Q9UJ99 828 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 SORCS3Q9UPU3 1222 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 IPPQ9Y573 584 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 TSPAN1O60635 241 aa13.59□□□□□ -0.23
TRAF4-202ENST00000262396 DDHD2O94830 711 aa13.59□□□□□ -0.23
TRAF4-202ENST00000262396 PTENP60484 403 aa13.59□□□□□ -0.23
TRAF4-202ENST00000262396 GUCY1B3Q02153 619 aa13.59□□□□□ -0.23
TRAF4-202ENST00000262396 PTPN14Q15678 1187 aa13.59□□□□□ -0.23
TRAF4-202ENST00000262396 OTOP3Q7RTS5 596 aa13.59□□□□□ -0.23
TRAF4-202ENST00000262396 C8orf76Q96K31 380 aa13.59□□□□□ -0.23
TRAF4-202ENST00000262396 KLHL5Q96PQ7 755 aa13.59□□□□□ -0.23
TRAF4-202ENST00000262396 GAD1Q99259 594 aa13.59□□□□□ -0.23
TRAF4-202ENST00000262396 PIDD1Q9HB75 910 aa13.59□□□□□ -0.23
TRAF4-202ENST00000262396 LIMD1Q9UGP4 676 aa13.59□□□□□ -0.23
TRAF4-202ENST00000262396 IRAK3Q9Y616 596 aa13.59□□□□□ -0.23
TRAF4-202ENST00000262396 ARHGEF35A5YM69 484 aa13.58□□□□□ -0.24
TRAF4-202ENST00000262396 ARL5CA6NH57 179 aa13.58□□□□□ -0.24
TRAF4-202ENST00000262396 JAK2O60674 1132 aa13.58□□□□□ -0.24
TRAF4-202ENST00000262396 TADA2AO75478 443 aa13.58□□□□□ -0.24
TRAF4-202ENST00000262396 NPTXRO95502 500 aa13.58□□□□□ -0.24
TRAF4-202ENST00000262396 SOD2P04179 222 aa13.58□□□□□ -0.24
TRAF4-202ENST00000262396 HOXA11P31270 313 aaPredicted RBP13.58□□□□□ -0.24
TRAF4-202ENST00000262396 GLUD2P49448 558 aa13.58□□□□□ -0.24
TRAF4-202ENST00000262396 SCNN1GP51170 649 aa13.58□□□□□ -0.24
TRAF4-202ENST00000262396 UBXN11Q5T124 520 aa13.58□□□□□ -0.24
TRAF4-202ENST00000262396 KANK3Q6NY19 840 aa13.58□□□□□ -0.24
TRAF4-202ENST00000262396 NSUN7Q8NE18 718 aaKnown RBP13.58□□□□□ -0.24
TRAF4-202ENST00000262396 MCPH1Q8NEM0 835 aa13.58□□□□□ -0.24
TRAF4-202ENST00000262396 BCL7CQ8WUZ0 217 aaPredicted RBP13.58□□□□□ -0.24
TRAF4-202ENST00000262396 ATOH1Q92858 354 aaPredicted RBP13.58□□□□□ -0.24
TRAF4-202ENST00000262396 NACC1Q96RE7 527 aa13.58□□□□□ -0.24
TRAF4-202ENST00000262396 EIF2AQ9BY44 585 aaKnown RBP13.58□□□□□ -0.24
TRAF4-202ENST00000262396 FBXL21Q9UKT6 434 aa13.58□□□□□ -0.24
TRAF4-202ENST00000262396 GIT1Q9Y2X7 761 aa13.58□□□□□ -0.24
TRAF4-202ENST00000262396 HES2Q9Y543 173 aa13.58□□□□□ -0.24
TRAF4-202ENST00000262396 MUC6Q6W4X9 2439 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 A0A087WWV3 80 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 STK25O00506 426 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 LYPLA2O95372 231 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 LARGE1O95461 756 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 GLUD1P00367 558 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 CNPP09543 421 aaKnown RBP13.57□□□□□ -0.24
TRAF4-202ENST00000262396 MYBP10242 640 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 FDPSP14324 419 aaKnown RBP13.57□□□□□ -0.24
TRAF4-202ENST00000262396 AKAP5P24588 427 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 AVPR2P30518 371 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 GBP2P32456 591 aaPredicted RBP13.57□□□□□ -0.24
TRAF4-202ENST00000262396 RARRES1P49788 294 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 POU5F1BQ06416 359 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 SPIRE1Q08AE8 756 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 CAPSQ13938 189 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 SLC27A1Q6PCB7 646 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 SMG8Q8ND04 991 aaKnown RBP13.57□□□□□ -0.24
TRAF4-202ENST00000262396 DEPTORQ8TB45 409 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 ASAP3Q8TDY4 903 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 SLC22A17Q8WUG5 538 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 STAMQ92783 540 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 ADPGKQ9BRR6 497 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 HERC2P3Q9BVR0 1158 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 MAN1C1Q9NR34 630 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 PRMT7Q9NVM4 692 aaPredicted RBP13.57□□□□□ -0.24
TRAF4-202ENST00000262396 KLK14Q9P0G3 267 aa13.57□□□□□ -0.24
TRAF4-202ENST00000262396 NOL7Q9UMY1 257 aaKnown RBP13.57□□□□□ -0.24
TRAF4-202ENST00000262396 POTEMA6NI47 508 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 ASGR2P07307 311 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 XRCC6P12956 609 aaKnown RBP eCLIP13.56□□□□□ -0.243e-10■■□□□ 12.6
TRAF4-202ENST00000262396 ARF4P18085 180 aaPredicted RBP13.56□□□□□ -0.24
TRAF4-202ENST00000262396 GLRA2P23416 452 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 CLCN4P51793 760 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 AFF1P51825 1210 aaKnown RBP13.56□□□□□ -0.24
TRAF4-202ENST00000262396 MBTD1Q05BQ5 628 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 ZNF174Q15697 407 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 IER5LQ5T953 404 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 HAUS3Q68CZ6 603 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 APBB1IPQ7Z5R6 666 aaPredicted RBP13.56□□□□□ -0.24
TRAF4-202ENST00000262396 GPR149Q86SP6 731 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 CDR2LQ86X02 465 aaPredicted RBP13.56□□□□□ -0.24
TRAF4-202ENST00000262396 GLYCTKQ8IVS8 523 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 CCDC83Q8IWF9 413 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 ZDHHC14Q8IZN3 488 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 FLCNQ8NFG4 579 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 IFT74Q96LB3 600 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 ZFP42Q96MM3 310 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 HSD17B14Q9BPX1 270 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 C2orf40Q9H1Z8 148 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 RNF39Q9H2S5 420 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 TUFT1Q9NNX1 390 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 XPNPEP1Q9NQW7 623 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms