RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 KCNA2P16389 499 aa14.79□□□□□ -0.04
SGCA-201ENST00000262018 FAM189BP81408 668 aa14.79□□□□□ -0.04
SGCA-201ENST00000262018 TYRO3Q06418 890 aa14.79□□□□□ -0.04
SGCA-201ENST00000262018 PLCB4Q15147 1175 aa14.79□□□□□ -0.04
SGCA-201ENST00000262018 VARS2Q5ST30 1063 aaKnown RBP14.79□□□□□ -0.04
SGCA-201ENST00000262018 ODR4Q5SWX8 454 aa14.79□□□□□ -0.04
SGCA-201ENST00000262018 JAKMIP3Q5VZ66 844 aa14.79□□□□□ -0.04
SGCA-201ENST00000262018 PCNX4Q63HM2 1172 aa14.79□□□□□ -0.04
SGCA-201ENST00000262018 NEK8Q86SG6 692 aa14.79□□□□□ -0.04
SGCA-201ENST00000262018 CABP7Q86V35 215 aa14.79□□□□□ -0.04
SGCA-201ENST00000262018 ABI1Q8IZP0 508 aa14.79□□□□□ -0.04
SGCA-201ENST00000262018 LRRC43Q8N309 656 aa14.79□□□□□ -0.04
SGCA-201ENST00000262018 AUTS2Q8WXX7 1259 aa14.79□□□□□ -0.04
SGCA-201ENST00000262018 ELAC1Q9H777 363 aaKnown RBP14.79□□□□□ -0.04
SGCA-201ENST00000262018 IGSF9Q9P2J2 1179 aa14.79□□□□□ -0.04
SGCA-201ENST00000262018 LAD1O00515 517 aa14.78□□□□□ -0.04
SGCA-201ENST00000262018 GPR182O15218 404 aa14.78□□□□□ -0.04
SGCA-201ENST00000262018 ADRB1P08588 477 aa14.78□□□□□ -0.04
SGCA-201ENST00000262018 SASS6Q6UVJ0 657 aa14.78□□□□□ -0.04
SGCA-201ENST00000262018 FAM43BQ6ZT52 329 aaPredicted RBP14.78□□□□□ -0.04
SGCA-201ENST00000262018 GPR149Q86SP6 731 aa14.78□□□□□ -0.04
SGCA-201ENST00000262018 SLC39A11Q8N1S5 342 aa14.78□□□□□ -0.04
SGCA-201ENST00000262018 GPR161Q8N6U8 529 aaKnown RBP14.78□□□□□ -0.04
SGCA-201ENST00000262018 TMEM40Q8WWA1 233 aa14.78□□□□□ -0.04
SGCA-201ENST00000262018 RSAD2Q8WXG1 361 aa14.78□□□□□ -0.04
SGCA-201ENST00000262018 PCYT2Q99447 389 aa14.78□□□□□ -0.04
SGCA-201ENST00000262018 SDF4Q9BRK5 362 aa14.78□□□□□ -0.04
SGCA-201ENST00000262018 SIT1Q9Y3P8 196 aa14.78□□□□□ -0.04
SGCA-201ENST00000262018 PRR5-ARHGAP8B1AHC4 643 aa14.77□□□□□ -0.04
SGCA-201ENST00000262018 NT5C1B-RDH14C9J2C7 533 aa14.77□□□□□ -0.04
SGCA-201ENST00000262018 HOXA2O43364 376 aa14.77□□□□□ -0.04
SGCA-201ENST00000262018 PRPHP41219 470 aa14.77□□□□□ -0.04
SGCA-201ENST00000262018 ARHGAP8P85298 464 aa14.77□□□□□ -0.04
SGCA-201ENST00000262018 UVSSAQ2YD98 709 aa14.77□□□□□ -0.04
SGCA-201ENST00000262018 MTHFD1LQ6UB35 978 aa14.77□□□□□ -0.04
SGCA-201ENST00000262018 KRBA2Q6ZNG9 492 aa14.77□□□□□ -0.04
SGCA-201ENST00000262018 TBCKQ8TEA7 893 aa14.77□□□□□ -0.04
SGCA-201ENST00000262018 SLC22A17Q8WUG5 538 aa14.77□□□□□ -0.04
SGCA-201ENST00000262018 GPRASP2Q96D09 838 aa14.77□□□□□ -0.04
SGCA-201ENST00000262018 PANK2Q9BZ23 570 aa14.77□□□□□ -0.04
SGCA-201ENST00000262018 AZI2Q9H6S1 392 aa14.77□□□□□ -0.04
SGCA-201ENST00000262018 RNF19AQ9NV58 838 aa14.77□□□□□ -0.04
SGCA-201ENST00000262018 DLGAP2Q9P1A6 1054 aa14.77□□□□□ -0.04
SGCA-201ENST00000262018 FANCMQ8IYD8 2048 aa14.77□□□□□ -0.04
SGCA-201ENST00000262018 DENND4AQ7Z401 1863 aa14.77□□□□□ -0.05
SGCA-201ENST00000262018 POTEMA6NI47 508 aa14.76□□□□□ -0.05
SGCA-201ENST00000262018 LONP1P36776 959 aaKnown RBP14.76□□□□□ -0.05
SGCA-201ENST00000262018 LMNB2Q03252 620 aa14.76□□□□□ -0.05
SGCA-201ENST00000262018 IL17AQ16552 155 aa14.76□□□□□ -0.05
SGCA-201ENST00000262018 POTEGQ6S5H5 508 aa14.76□□□□□ -0.05
SGCA-201ENST00000262018 VPS52Q8N1B4 723 aa14.76□□□□□ -0.05
SGCA-201ENST00000262018 CDHR1Q96JP9 859 aa14.76□□□□□ -0.05
SGCA-201ENST00000262018 PPP1R16BQ96T49 567 aa14.76□□□□□ -0.05
SGCA-201ENST00000262018 RTKNQ9BST9 563 aa14.76□□□□□ -0.05
SGCA-201ENST00000262018 ANO3Q9BYT9 981 aa14.76□□□□□ -0.05
SGCA-201ENST00000262018 TMEM60Q9H2L4 133 aa14.76□□□□□ -0.05
SGCA-201ENST00000262018 SFXN1Q9H9B4 322 aa14.76□□□□□ -0.05
SGCA-201ENST00000262018 KIAA1468Q9P260 1216 aa14.76□□□□□ -0.05
SGCA-201ENST00000262018 VWA3AA6NCI4 1184 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 EDIL3O43854 480 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 KLRC1P26715 233 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 SREBF1P36956 1147 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 LETM2Q2VYF4 491 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 LONRF3Q496Y0 759 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 USP49Q70CQ1 688 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 FAM228AQ86W67 206 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 RNF169Q8NCN4 708 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 RNF214Q8ND24 703 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 SECISBP2LQ93073 1101 aaKnown RBP14.75□□□□□ -0.05
SGCA-201ENST00000262018 TMEM169Q96HH4 297 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 USP18Q9UMW8 372 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 CACNA1IQ9P0X4 2223 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 POLR2DO15514 142 aaKnown RBP14.75□□□□□ -0.05
SGCA-201ENST00000262018 CCNT1O60563 726 aaKnown RBP14.75□□□□□ -0.05
SGCA-201ENST00000262018 CAVIN2O95810 425 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 OR52Z1P0C646 297 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 GBP2P32456 591 aaPredicted RBP14.75□□□□□ -0.05
SGCA-201ENST00000262018 DSC3Q14574 896 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 STX1AQ16623 288 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 PHLDB3Q6NSJ2 640 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 DTHD1Q6ZMT9 781 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 SLC44A3Q8N4M1 653 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 CNNM3Q8NE01 707 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 FAM200AQ8TCP9 573 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 GPR152Q8TDT2 470 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 EPSTI1Q96J88 318 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 NAP1L4Q99733 375 aaKnown RBP14.75□□□□□ -0.05
SGCA-201ENST00000262018 ZBP1Q9H171 429 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 USP25Q9UHP3 1055 aa14.75□□□□□ -0.05
SGCA-201ENST00000262018 SPTLC1O15269 473 aa14.74□□□□□ -0.05
SGCA-201ENST00000262018 ACTN4O43707 911 aaKnown RBP14.74□□□□□ -0.05
SGCA-201ENST00000262018 NEMFO60524 1076 aa14.74□□□□□ -0.05
SGCA-201ENST00000262018 SRFP11831 508 aa14.74□□□□□ -0.05
SGCA-201ENST00000262018 GLULP15104 373 aa14.74□□□□□ -0.05
SGCA-201ENST00000262018 ITGB5P18084 799 aa14.74□□□□□ -0.05
SGCA-201ENST00000262018 ALDH7A1P49419 539 aaKnown RBP14.74□□□□□ -0.05
SGCA-201ENST00000262018 BCAR1P56945 870 aa14.74□□□□□ -0.05
SGCA-201ENST00000262018 KIZQ2M2Z5 673 aa14.74□□□□□ -0.05
SGCA-201ENST00000262018 ANO6Q4KMQ2 910 aa14.74□□□□□ -0.05
SGCA-201ENST00000262018 PPP4R3AQ6IN85 833 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms