RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 ANKRD36BP1Q96IX9 119 aa11.39□□□□□ -0.59
SLC6A4-201ENST00000261707 PARVBQ9HBI1 364 aa11.39□□□□□ -0.59
SLC6A4-201ENST00000261707 PSMA2P25787 234 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 ST13P50502 369 aaKnown RBP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 TBL3Q12788 808 aaKnown RBP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 MIS18BP1Q6P0N0 1132 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 OLFML1Q6UWY5 402 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 MFN1Q8IWA4 741 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 CMTM5Q96DZ9 223 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 TMA7Q9Y2S6 64 aaKnown RBP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 FHOD1Q9Y613 1164 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 YTHDC2Q9H6S0 1430 aaKnown RBP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 PRR29P0C7W0 189 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 PAMP19021 973 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 THEM5Q8N1Q8 247 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 C7orf31Q8N865 590 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 C3orf20Q8ND61 904 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 RNF139Q8WU17 664 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 OPTNQ96CV9 577 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 NSL1Q96IY1 281 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 VPS39Q96JC1 886 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 IRX2Q9BZI1 471 aaPredicted RBP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 DNAJC12Q9UKB3 198 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 TTC26A0AVF1 554 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 B2RBV5 119 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 NFX1Q12986 1120 aaKnown RBP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 IZUMO3Q5VZ72 239 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 KDM7AQ6ZMT4 941 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 TTC13Q8NBP0 860 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 GCOM2Q9BZD3 368 aaPredicted RBP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 CAAP1Q9H8G2 361 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 POLE3Q9NRF9 147 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 SFMBT1Q9UHJ3 866 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 MTO1Q9Y2Z2 717 aaKnown RBP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 KIF21AQ7Z4S6 1674 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 SH2B2O14492 632 aaPredicted RBP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 AP1G2O75843 785 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 CCND2P30279 289 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 KRT17Q04695 432 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 DPYDQ12882 1025 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 ITIH4Q14624 930 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 ADRM1Q16186 407 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 INAQ16352 499 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 KYNUQ16719 465 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 SUGP1Q8IWZ8 645 aaKnown RBP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 TAGAPQ8N103 731 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 HNRNPLLQ8WVV9 542 aaKnown RBP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 TMA16Q96EY4 203 aaKnown RBP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 CNOT8Q9UFF9 292 aaKnown RBP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 OCM2P0CE71 109 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 OCMP0CE72 109 aaPredicted RBP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 MXI1P50539 228 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 RPS6P62753 249 aaKnown RBP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 PLOD1Q02809 727 aaPredicted RBP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 MECOMQ03112 1051 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 NSUN2Q08J23 767 aaKnown RBP eCLIP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 OR6B2Q6IFH4 312 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 ARHGEF1Q92888 912 aaKnown RBP11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 DBNDD1Q9H9R9 158 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 AP4S1Q9Y587 144 aa11.38□□□□□ -0.59
SLC6A4-201ENST00000261707 PIK3R2O00459 728 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 KCNA6P17658 529 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 GRK2P25098 689 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 TARSP26639 723 aaKnown RBP11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 HADHAP40939 763 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 ABCB5Q2M3G0 1257 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 CLEC4FQ8N1N0 589 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 AGR3Q8TD06 166 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 CATSPER2Q96P56 530 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 CDV3Q9UKY7 258 aaKnown RBP11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 TRPM2O94759 1503 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 TRIM25Q14258 630 aaKnown RBP11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 PACS2Q86VP3 889 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 TRMT2AQ8IZ69 625 aaKnown RBP11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 NACC1Q96RE7 527 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 MRPS26Q9BYN8 205 aaKnown RBP11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 GOLGA8IPA6NC78 632 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 MAP3K13O43283 966 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 PMLP29590 882 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 TJAP1Q5JTD0 557 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 KRT26Q7Z3Y9 468 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 DDX53Q86TM3 631 aaKnown RBP11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 LRRC47Q8N1G4 583 aaKnown RBP11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 TBCKQ8TEA7 893 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 TRIM8Q9BZR9 551 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 WNT8AQ9H1J5 351 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 FBXL21Q9UKT6 434 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 PRCPP42785 496 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 SCG3Q8WXD2 468 aaKnown RBP11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 MPP4Q96JB8 637 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 PPP1R36Q96LQ0 422 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 DNAJC7Q99615 494 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 NUP85Q9BW27 656 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 TMEM247A6NEH6 219 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 PLA2G4BP0C869 781 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 IFNA8P32881 189 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 RUNX1T1Q06455 604 aa11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 KRR1Q13601 381 aaKnown RBP11.37□□□□□ -0.59
SLC6A4-201ENST00000261707 CDC37Q16543 378 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms