RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 DBN1Q16643 649 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 TAF1BQ53T94 588 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-201ENST00000261443 DCAF17Q5H9S7 520 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-201ENST00000261443 DPY19L2P1Q6NXN4 242 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 ZNF365Q70YC5 407 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 CYFIP1Q7L576 1253 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 EPM2AIP1Q7L775 607 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-201ENST00000261443 CYP4X1Q8N118 509 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 CFAP61Q8NHU2 1237 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 LNX1Q8TBB1 728 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-201ENST00000261443 SH3RF3Q8TEJ3 882 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-201ENST00000261443 AZIN2Q96A70 460 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 DNAJC19Q96DA6 116 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 NUDT12Q9BQG2 462 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 SPATA16Q9BXB7 569 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 SPZ1Q9BXG8 430 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 BMP2KQ9NSY1 1161 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-201ENST00000261443 TMCO1Q9UM00 188 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 SLC4A7Q9Y6M7 1214 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 NUP98P52948 1817 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 COL16A1Q07092 1604 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-201ENST00000261443 A0A1W2PRG0 241 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 POTEFA5A3E0 1075 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 SMCO2A6NFE2 343 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 FAM196BA6NMK8 535 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 CYTH3O43739 400 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 POTEIP0CG38 1075 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 POTEJP0CG39 1038 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 CTNNA2P26232 953 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 CTTNQ14247 550 aaKnown RBP7.73□□□□□ -1.17
CSDE1-201ENST00000261443 TCERG1LQ5VWI1 586 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 GJB7Q6PEY0 223 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 POTEEQ6S8J3 1075 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 DSTYKQ6XUX3 929 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 HS2ST1Q7LGA3 356 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 UBL4BQ8N7F7 174 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 DTX3LQ8TDB6 740 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 STMN2Q93045 179 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 DHX36Q9H2U1 1008 aaKnown RBP7.73□□□□□ -1.17
CSDE1-201ENST00000261443 C6orf50Q9HD87 102 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 ARPP21Q9UBL0 812 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-201ENST00000261443 MAD2L2Q9UI95 211 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 ZFP69BQ9UJL9 534 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 AJAP1Q9UKB5 411 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-201ENST00000261443 BLOC1S6Q9UL45 172 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 KIF13BQ9NQT8 1826 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 XRCC5P13010 732 aaKnown RBP7.73□□□□□ -1.17
CSDE1-201ENST00000261443 LMNB1P20700 586 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 COILP38432 576 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-201ENST00000261443 STAT1P42224 750 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 KCNJ1P48048 391 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 FXR2P51116 673 aaKnown RBP eCLIP7.73□□□□□ -1.175e-7■□□□□ 10.4
CSDE1-201ENST00000261443 AP1B1Q10567 949 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 MOGSQ13724 837 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 GRM4Q14833 912 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 GSTA3Q16772 222 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 ZNF568Q3ZCX4 644 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 HERC4Q5GLZ8 1057 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-201ENST00000261443 MYLK4Q86YV6 388 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-201ENST00000261443 CCDC65Q8IXS2 484 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 ANKRD35Q8N283 1001 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 KCTD10Q9H3F6 313 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 TLE6Q9H808 572 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 SLCO1B3Q9NPD5 702 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 EMILIN3Q9NT22 766 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 SEPT11Q9NVA2 429 aaKnown RBP7.73□□□□□ -1.17
CSDE1-201ENST00000261443 DNAJC17Q9NVM6 304 aaKnown RBP7.73□□□□□ -1.17
CSDE1-201ENST00000261443 PCDHGA4Q9Y5G9 962 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 ADGRA3Q8IWK6 1321 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 TMEM110-MUSTN1A8MSY1 372 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 THAP12O43422 761 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 TBX10O75333 385 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 TTC4O95801 387 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 CYP1A1P04798 512 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-201ENST00000261443 LYNP07948 512 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 FAM200BP0CF97 657 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 ALAS1P13196 640 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 ATF3P18847 181 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 GNA11P29992 359 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 JAM2P57087 298 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 KYNUQ16719 465 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 SLC35G1Q2M3R5 365 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 SLC4A8Q2Y0W8 1093 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 CERKLQ49MI3 558 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-201ENST00000261443 C1QTNF12Q5T7M4 302 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 SEL1L2Q5TEA6 688 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 DPY19L2Q6NUT2 758 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 CEP128Q6ZU80 1094 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 SLC30A5Q8TAD4 765 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 SCFD1Q8WVM8 642 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 NCSTNQ92542 709 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 SPOCK2Q92563 424 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 ARHGEF26Q96DR7 871 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 MTMR9Q96QG7 549 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 NR1H4Q96RI1 486 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-201ENST00000261443 ZNF184Q99676 751 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-201ENST00000261443 CENPKQ9BS16 269 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 THAP2Q9H0W7 228 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 ZHX3Q9H4I2 956 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 METTL14Q9HCE5 456 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms