RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ZFATQ9P243 1243 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 CPDO75976 1380 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 NPHP3-ACAD11A0A0J9YXS1 232 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 FTLP02792 175 aaPredicted RBP10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 YWHAHQ04917 246 aaPredicted RBP10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 ALX1Q15699 326 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 SYCP2LQ5T4T6 812 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 GFM2Q969S9 779 aaKnown RBP10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 KIFC3Q9BVG8 833 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 TMEM120BA0PK00 339 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 DYTNA2CJ06 578 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 AP1G2O75843 785 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 ZRANB2O95218 330 aaKnown RBP eCLIP10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 NQO1P15559 274 aaKnown RBP10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 OSTNP61366 133 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 TFAMQ00059 246 aaKnown RBP10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 SYDE2Q5VT97 1194 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 LRRC8EQ6NSJ5 796 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 TTC25Q96NG3 672 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 GIMAP4Q9NUV9 329 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 BARHL2Q9NY43 387 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 AURKCQ9UQB9 309 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 CLEC11AQ9Y240 323 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 L3MBTL1Q9Y468 752 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 WDR17Q8IZU2 1322 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 CCDC22O60826 627 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 PDE5AO76074 875 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 VHLP40337 213 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 CCDC15Q0P6D6 951 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 GRM1Q13255 1194 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 KNOP1Q1ED39 458 aaKnown RBP10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 ZNF394Q53GI3 561 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 AGBL2Q5U5Z8 902 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 ZBTB33Q86T24 672 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 DBNDD1Q9H9R9 158 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 PITPNM2Q9BZ72 1349 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 SRGNP10124 158 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 KIAA1755Q5JYT7 1200 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 ADSSL1Q8N142 457 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 RUBCNQ92622 972 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 FAM149B1Q96BN6 582 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 CEP95Q96GE4 821 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 CARD9Q9H257 536 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 BSDC1Q9NW68 430 aaPredicted RBP10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 PCDHA6Q9UN73 950 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 PCDHA8Q9Y5H6 950 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 ITIH6Q6UXX5 1313 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 KRT38O76015 456 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 COPB2P35606 906 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 HDAC4P56524 1084 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 CAV1Q03135 178 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 RCN1Q15293 331 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 GUF1Q8N442 669 aaKnown RBP10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 CCNYL1Q8N7R7 359 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 CDC26Q8NHZ8 85 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 PAGR1Q9BTK6 254 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 ADNPQ9H2P0 1102 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 OLFML3Q9NRN5 406 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 E9PCH4 1651 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 H0YCG3 227 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 KRT8P05787 483 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 TRIM9Q9C026 710 aa10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 SRP68Q9UHB9 627 aaKnown RBP10.35□□□□□ -0.75
CTDSPL2-201ENST00000260327 STK4Q13043 487 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 MORF4L2Q15014 288 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 OR6B2Q6IFH4 312 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 KDM7AQ6ZMT4 941 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 CACYBPQ9HB71 228 aaKnown RBP10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 PRPSAP2O60256 369 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 ATP6V1G2O95670 118 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 PSMA2P25787 234 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 SLC17A8Q8NDX2 589 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 NMD3Q96D46 503 aaKnown RBP10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 ANKARQ7Z5J8 1434 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 NBPF26B4DH59 902 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 TRIM49P0CI25 452 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 TRIM49CP0CI26 452 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 GJC2Q5T442 439 aaPredicted RBP10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 DAB2IPQ5VWQ8 1189 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 NBPF15Q8N660 670 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 FAM81BQ96LP2 452 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 CNBD2Q96M20 576 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 PHF20Q9BVI0 1012 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 APOL6Q9BWW8 343 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 TSSK1BQ9BXA7 367 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 ALKQ9UM73 1620 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 B2RBV5 119 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 USP17L10C9JJH3 530 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 SSTR3P32745 418 aaPredicted RBP10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 CACNB3P54284 484 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 DHX34Q14147 1143 aaKnown RBP10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 KCNB1Q14721 858 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 C9orf72Q96LT7 481 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 GOLPH3Q9H4A6 298 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 IPO11Q9UI26 975 aaKnown RBP10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 L1RE1Q9UN81 338 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 MAGEA13PA6NCF6 341 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 PSMD14O00487 310 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 SASH3O75995 380 aa10.34□□□□□ -0.75
CTDSPL2-201ENST00000260327 NPR1P16066 1061 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms