RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 FIBCD1Q8N539 461 aa18.44■□□□□ 0.54
SDCBP-201ENST00000260130 MYCT1Q8N699 235 aa18.44■□□□□ 0.54
SDCBP-201ENST00000260130 KCNH3Q9ULD8 1083 aa18.44■□□□□ 0.54
SDCBP-201ENST00000260130 CHD7Q9P2D1 2997 aa18.44■□□□□ 0.54
SDCBP-201ENST00000260130 TBCAO75347 108 aaKnown RBP18.44■□□□□ 0.54
SDCBP-201ENST00000260130 CMTR2Q8IYT2 770 aaKnown RBP18.44■□□□□ 0.54
SDCBP-201ENST00000260130 TGS1Q96RS0 853 aaKnown RBP18.44■□□□□ 0.54
SDCBP-201ENST00000260130 PYM1Q9BRP8 204 aaKnown RBP18.44■□□□□ 0.54
SDCBP-201ENST00000260130 ZHX3Q9H4I2 956 aa18.44■□□□□ 0.54
SDCBP-201ENST00000260130 CERS4Q9HA82 394 aa18.44■□□□□ 0.54
SDCBP-201ENST00000260130 PHLPP2Q6ZVD8 1323 aa18.43■□□□□ 0.54
SDCBP-201ENST00000260130 CNTNAP2Q9UHC6 1331 aa18.43■□□□□ 0.54
SDCBP-201ENST00000260130 TTLL13PA6NNM8 815 aa18.43■□□□□ 0.54
SDCBP-201ENST00000260130 UBE2HP62256 183 aa18.43■□□□□ 0.54
SDCBP-201ENST00000260130 SPRED2Q7Z698 418 aa18.43■□□□□ 0.54
SDCBP-201ENST00000260130 CDR2LQ86X02 465 aaPredicted RBP18.43■□□□□ 0.54
SDCBP-201ENST00000260130 TMEM161BQ8NDZ6 487 aa18.43■□□□□ 0.54
SDCBP-201ENST00000260130 EIF2AQ9BY44 585 aaKnown RBP18.43■□□□□ 0.54
SDCBP-201ENST00000260130 TNMDQ9H2S6 317 aa18.43■□□□□ 0.54
SDCBP-201ENST00000260130 KBTBD4Q9NVX7 518 aa18.43■□□□□ 0.54
SDCBP-201ENST00000260130 USP20Q9Y2K6 914 aa18.43■□□□□ 0.54
SDCBP-201ENST00000260130 A0A1B0GVL5 298 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 ERVK-21P61565 698 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 TMEM132AQ24JP5 1023 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 PAN2Q504Q3 1202 aaKnown RBP18.42■□□□□ 0.54
SDCBP-201ENST00000260130 SLC27A1Q6PCB7 646 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 MRPL10Q7Z7H8 261 aaKnown RBP18.42■□□□□ 0.54
SDCBP-201ENST00000260130 CNNM3Q8NE01 707 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 STAMQ92783 540 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 DNAJC19Q96DA6 116 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 PGBD4Q96DM1 585 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 LRRC27Q9C0I9 530 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 RNF19AQ9NV58 838 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 TBKBP1A7MCY6 615 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 EDN1P05305 212 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 PTMAP06454 111 aaKnown RBP18.42■□□□□ 0.54
SDCBP-201ENST00000260130 NCKAP1LP55160 1127 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 AMPD3Q01432 767 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 LONRF3Q496Y0 759 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 TAS1R3Q7RTX0 852 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 ABI1Q8IZP0 508 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 ARNTL2Q8WYA1 636 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 LPPQ93052 612 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 TRIM6Q9C030 488 aaPredicted RBP18.42■□□□□ 0.54
SDCBP-201ENST00000260130 TMEM117Q9H0C3 514 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 COL4A6Q14031 1691 aa18.42■□□□□ 0.54
SDCBP-201ENST00000260130 A0A1W2PQ27 194 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 A0A1W2PQ64 194 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 A0A1W2PQD8 194 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 H0YCG3 227 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 MAPTP10636 758 aaKnown RBP18.41■□□□□ 0.54
SDCBP-201ENST00000260130 PFKFB1P16118 471 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 NT5DC1Q5TFE4 455 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 HAUS6Q7Z4H7 955 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 SMG8Q8ND04 991 aaKnown RBP18.41■□□□□ 0.54
SDCBP-201ENST00000260130 GUCD1Q96NT3 240 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 CASD1Q96PB1 797 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 C17orf80Q9BSJ5 609 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 PRDM12Q9H4Q4 367 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 MAGEF1Q9HAY2 307 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 MTUS1Q9ULD2 1270 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 IPPQ9Y573 584 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 N4BP3O15049 544 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 STRN3Q13033 797 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 CLLU1OSQ5K130 101 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 FAM178BQ8IXR5 827 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 CLP1Q92989 425 aaKnown RBP18.41■□□□□ 0.54
SDCBP-201ENST00000260130 SAMD11Q96NU1 681 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 CDX2Q99626 313 aaPredicted RBP18.41■□□□□ 0.54
SDCBP-201ENST00000260130 PDZD7Q9H5P4 517 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 HPSEQ9Y251 543 aa18.41■□□□□ 0.54
SDCBP-201ENST00000260130 MEIS3P2A8K0S8 358 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 NPTXRO95502 500 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 SCP2P22307 547 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 TPRNQ4KMQ1 711 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 AGMOQ6ZNB7 445 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 HELQQ8TDG4 1101 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 KCNN1Q92952 543 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 FIZ1Q96SL8 496 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 MRPL4Q9BYD3 311 aaKnown RBP18.4■□□□□ 0.54
SDCBP-201ENST00000260130 MRPL42Q9Y6G3 142 aaKnown RBP18.4■□□□□ 0.54
SDCBP-201ENST00000260130 FAM237AA0A1B0GTK4 181 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 LINC00271P0C7V0 271 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 IDEP14735 1019 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 EPC2Q52LR7 807 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 ATF7IP2Q5U623 682 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 GLB1LQ6UWU2 654 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 TMEM192Q8IY95 271 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 CEP57L1Q8IYX8 460 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 RSPH1Q8WYR4 309 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 ACO2Q99798 780 aaKnown RBP18.4■□□□□ 0.54
SDCBP-201ENST00000260130 ADPGKQ9BRR6 497 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 TYW1Q9NV66 732 aaKnown RBP18.4■□□□□ 0.54
SDCBP-201ENST00000260130 SEL1LQ9UBV2 794 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 TNFSF13BQ9Y275 285 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 RWDD3Q9Y3V2 267 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 HES2Q9Y543 173 aa18.4■□□□□ 0.54
SDCBP-201ENST00000260130 K7ENM7 598 aa18.39■□□□□ 0.53
SDCBP-201ENST00000260130 SLFN14P0C7P3 912 aa18.39■□□□□ 0.53
SDCBP-201ENST00000260130 ITGA4P13612 1032 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms