RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 PLVAPQ9BX97 442 aa20.57■□□□□ 0.88
UPK3B-201ENST00000257632 TMEM134Q9H6X4 195 aa20.57■□□□□ 0.88
UPK3B-201ENST00000257632 RSAD1Q9HA92 442 aa20.57■□□□□ 0.88
UPK3B-201ENST00000257632 PARVGQ9HBI0 331 aa20.57■□□□□ 0.88
UPK3B-201ENST00000257632 ARHGAP28Q9P2N2 729 aa20.57■□□□□ 0.88
UPK3B-201ENST00000257632 PCDHB12Q9Y5F1 795 aa20.57■□□□□ 0.88
UPK3B-201ENST00000257632 A0A087X0B3 334 aa20.56■□□□□ 0.88
UPK3B-201ENST00000257632 MEIS3P2A8K0S8 358 aa20.56■□□□□ 0.88
UPK3B-201ENST00000257632 C5orf67F2Z3F1 127 aa20.56■□□□□ 0.88
UPK3B-201ENST00000257632 H0YCG3 227 aa20.56■□□□□ 0.88
UPK3B-201ENST00000257632 H3BNC9 293 aa20.56■□□□□ 0.88
UPK3B-201ENST00000257632 LINC00271P0C7V0 271 aa20.56■□□□□ 0.88
UPK3B-201ENST00000257632 LAG3P18627 525 aa20.56■□□□□ 0.88
UPK3B-201ENST00000257632 ANP32AP39687 249 aaKnown RBP20.56■□□□□ 0.88
UPK3B-201ENST00000257632 STRN3Q13033 797 aa20.56■□□□□ 0.88
UPK3B-201ENST00000257632 AXDND1Q5T1B0 1012 aaPredicted RBP20.56■□□□□ 0.88
UPK3B-201ENST00000257632 DYMQ7RTS9 669 aa20.56■□□□□ 0.88
UPK3B-201ENST00000257632 SMG8Q8ND04 991 aaKnown RBP20.56■□□□□ 0.88
UPK3B-201ENST00000257632 URGCPQ8TCY9 931 aa20.56■□□□□ 0.88
UPK3B-201ENST00000257632 PPM1EQ8WY54 764 aa20.56■□□□□ 0.88
UPK3B-201ENST00000257632 CHAMP1Q96JM3 812 aa20.56■□□□□ 0.88
UPK3B-201ENST00000257632 UBN1Q9NPG3 1134 aa20.56■□□□□ 0.88
UPK3B-201ENST00000257632 HCSTQ9UBK5 93 aa20.56■□□□□ 0.88
UPK3B-201ENST00000257632 USP20Q9Y2K6 914 aa20.56■□□□□ 0.88
UPK3B-201ENST00000257632 TCHHQ07283 1943 aa20.56■□□□□ 0.88
UPK3B-201ENST00000257632 TTLL13PA6NNM8 815 aa20.55■□□□□ 0.88
UPK3B-201ENST00000257632 LPXNO60711 386 aa20.55■□□□□ 0.88
UPK3B-201ENST00000257632 RNASELQ05823 741 aaKnown RBP20.55■□□□□ 0.88
UPK3B-201ENST00000257632 PTPROQ16827 1216 aa20.55■□□□□ 0.88
UPK3B-201ENST00000257632 NOMO2Q5JPE7 1267 aa20.55■□□□□ 0.88
UPK3B-201ENST00000257632 ATF7IP2Q5U623 682 aa20.55■□□□□ 0.88
UPK3B-201ENST00000257632 AGMOQ6ZNB7 445 aa20.55■□□□□ 0.88
UPK3B-201ENST00000257632 APBB1IPQ7Z5R6 666 aaPredicted RBP20.55■□□□□ 0.88
UPK3B-201ENST00000257632 LEO1Q8WVC0 666 aaPredicted RBP20.55■□□□□ 0.88
UPK3B-201ENST00000257632 DHX58Q96C10 678 aa20.55■□□□□ 0.88
UPK3B-201ENST00000257632 NTPCRQ9BSD7 190 aaKnown RBP20.55■□□□□ 0.88
UPK3B-201ENST00000257632 MRPL4Q9BYD3 311 aaKnown RBP20.55■□□□□ 0.88
UPK3B-201ENST00000257632 PDZD7Q9H5P4 517 aa20.55■□□□□ 0.88
UPK3B-201ENST00000257632 HES2Q9Y543 173 aa20.55■□□□□ 0.88
UPK3B-201ENST00000257632 MTCH2Q9Y6C9 303 aa20.55■□□□□ 0.88
UPK3B-201ENST00000257632 CHD9Q3L8U1 2897 aa20.54■□□□□ 0.88
UPK3B-201ENST00000257632 OFD1O75665 1012 aa20.54■□□□□ 0.88
UPK3B-201ENST00000257632 EDN1P05305 212 aa20.54■□□□□ 0.88
UPK3B-201ENST00000257632 CCDC85BQ15834 202 aaPredicted RBP20.54■□□□□ 0.88
UPK3B-201ENST00000257632 LRRC55Q6ZSA7 311 aa20.54■□□□□ 0.88
UPK3B-201ENST00000257632 IQUBQ8NA54 791 aa20.54■□□□□ 0.88
UPK3B-201ENST00000257632 COLGALT1Q8NBJ5 622 aa20.54■□□□□ 0.88
UPK3B-201ENST00000257632 DDX12PQ92771 950 aa20.54■□□□□ 0.88
UPK3B-201ENST00000257632 P2RX5Q93086 422 aa20.54■□□□□ 0.88
UPK3B-201ENST00000257632 SCAND2PQ9GZW5 306 aaPredicted RBP20.54■□□□□ 0.88
UPK3B-201ENST00000257632 CUEDC2Q9H467 287 aa20.54■□□□□ 0.88
UPK3B-201ENST00000257632 NXF3Q9H4D5 531 aaKnown RBP20.54■□□□□ 0.88
UPK3B-201ENST00000257632 CWH43Q9H720 699 aa20.54■□□□□ 0.88
UPK3B-201ENST00000257632 LMCD1Q9NZU5 365 aa20.54■□□□□ 0.88
UPK3B-201ENST00000257632 MYMKA6NI61 221 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 K7ENM7 598 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 TRAK2O60296 914 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 POU3F3P20264 500 aaPredicted RBP20.53■□□□□ 0.88
UPK3B-201ENST00000257632 ZNF131P52739 623 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 NCKAP1LP55160 1127 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 CSPP1Q1MSJ5 1256 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 DCAF4L1Q3SXM0 396 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 NT5DC1Q5TFE4 455 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 RESP18Q5W5W9 173 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 EEF1DP3Q658K8 133 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 HAUS6Q7Z4H7 955 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 FAM178BQ8IXR5 827 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 THNSL1Q8IYQ7 743 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 KLHL23Q8NBE8 558 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 TMEM161BQ8NDZ6 487 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 ZNF558Q96NG5 402 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 LRRC27Q9C0I9 530 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 KANSL3Q9P2N6 904 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 PARP2Q9UGN5 583 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 TNFSF13BQ9Y275 285 aa20.53■□□□□ 0.88
UPK3B-201ENST00000257632 PRRC2BQ5JSZ5 2229 aaKnown RBP20.52■□□□□ 0.88
UPK3B-201ENST00000257632 POLR2DO15514 142 aaKnown RBP20.52■□□□□ 0.88
UPK3B-201ENST00000257632 MAPTP10636 758 aaKnown RBP20.52■□□□□ 0.88
UPK3B-201ENST00000257632 IDEP14735 1019 aa20.52■□□□□ 0.88
UPK3B-201ENST00000257632 MLH1P40692 756 aa20.52■□□□□ 0.88
UPK3B-201ENST00000257632 ZNF568Q3ZCX4 644 aa20.52■□□□□ 0.88
UPK3B-201ENST00000257632 TAS1R3Q7RTX0 852 aa20.52■□□□□ 0.88
UPK3B-201ENST00000257632 MRPL38Q96DV4 380 aaKnown RBP20.52■□□□□ 0.88
UPK3B-201ENST00000257632 BICD1Q96G01 975 aa20.52■□□□□ 0.88
UPK3B-201ENST00000257632 FAM193BQ96PV7 902 aaPredicted RBP20.52■□□□□ 0.88
UPK3B-201ENST00000257632 GAD1Q99259 594 aa20.52■□□□□ 0.88
UPK3B-201ENST00000257632 ACO2Q99798 780 aaKnown RBP20.52■□□□□ 0.88
UPK3B-201ENST00000257632 PYM1Q9BRP8 204 aaKnown RBP20.52■□□□□ 0.88
UPK3B-201ENST00000257632 TCHPQ9BT92 498 aa20.52■□□□□ 0.88
UPK3B-201ENST00000257632 TARS2Q9BW92 718 aaKnown RBP20.52■□□□□ 0.88
UPK3B-201ENST00000257632 GBP3Q9H0R5 595 aa20.52■□□□□ 0.88
UPK3B-201ENST00000257632 LMAN2LQ9H0V9 348 aa20.52■□□□□ 0.88
UPK3B-201ENST00000257632 RNF39Q9H2S5 420 aa20.52■□□□□ 0.88
UPK3B-201ENST00000257632 TNMDQ9H2S6 317 aa20.52■□□□□ 0.88
UPK3B-201ENST00000257632 ALG13Q9NP73 1137 aaKnown RBP20.52■□□□□ 0.88
UPK3B-201ENST00000257632 TBC1D13Q9NVG8 400 aa20.52■□□□□ 0.88
UPK3B-201ENST00000257632 GIT1Q9Y2X7 761 aa20.52■□□□□ 0.88
UPK3B-201ENST00000257632 GRM6O15303 877 aa20.51■□□□□ 0.87
UPK3B-201ENST00000257632 ZC3H11AO75152 810 aaKnown RBP eCLIP20.51■□□□□ 0.87
UPK3B-201ENST00000257632 CSPG5O95196 566 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms