RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 ZNF579Q8NAF0 562 aaKnown RBP13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 KDM4CQ9H3R0 1056 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 PPCSQ9HAB8 311 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 MRGBPQ9NV56 204 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 CCDC195A0A1B0GUA6 201 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 TEX33O43247 280 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 ATP2B4P23634 1241 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 ATP6V1E1P36543 226 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 GPC5P78333 572 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 UBE3AQ05086 875 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 POLA2Q14181 598 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 MTF1Q14872 753 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 CDC37Q16543 378 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 TJAP1Q5JTD0 557 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 TTC33Q6PID6 262 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 EDEM3Q9BZQ6 932 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 C15orf41Q9Y2V0 281 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 SCNN1DP51172 638 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 CAPRIN1Q14444 709 aaKnown RBP13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 KCNB1Q14721 858 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 HLFQ16534 295 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 NLGN1Q8N2Q7 840 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 STX19Q8N4C7 294 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 SKA2Q8WVK7 121 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 SCG3Q8WXD2 468 aaKnown RBP13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 BRIP1Q9BX63 1249 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 FAM192AQ9GZU8 254 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 SRP68Q9UHB9 627 aaKnown RBP13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 L1RE1Q9UN81 338 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 LRCH1Q9Y2L9 728 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 TULP4Q9NRJ4 1543 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 KRT7P08729 469 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 NR5A1Q13285 461 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 KIAA1755Q5JYT7 1200 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 SFR1Q86XK3 245 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 CCNYL1Q8N7R7 359 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 GPKOWQ92917 476 aaPredicted RBP eCLIP13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 ARL8AQ96BM9 186 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 SPATA17Q96L03 361 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 PPRC1Q5VV67 1664 aaKnown RBP13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 DIP2CQ9Y2E4 1556 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 ERVV-1B6SEH8 477 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 ATP6V1G2O95670 118 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 ADARP55265 1226 aaKnown RBP13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 ROR2Q01974 943 aaKnown RBP13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 TFDP2Q14188 446 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 C16orf89Q6UX73 402 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 NLRX1Q86UT6 975 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 HEATR4Q86WZ0 1026 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 WDR60Q8WVS4 1066 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 ATAD3AQ9NVI7 634 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 DKK3Q9UBP4 350 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 TBC1D4O60343 1298 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 DMP1Q13316 513 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 WDR93Q6P2C0 686 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 FLAD1Q8NFF5 587 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 ZDHHC9Q9Y397 364 aa13.93□□□□□ -0.18
PCDHGA3-201ENST00000253812 PJA2O43164 708 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 AHCYL1O43865 530 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 PRPSAP2O60256 369 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 HSPA1AP0DMV8 641 aaKnown RBP13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 HSPA1BP0DMV9 641 aaKnown RBP13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 PPIDQ08752 370 aaKnown RBP13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 USH1GQ495M9 461 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 ZBED8Q8IZ13 594 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 PROM2Q8N271 834 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 BBS5Q8N3I7 341 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 CALML6Q8TD86 181 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 CYGBQ8WWM9 190 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 MXD3Q9BW11 206 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 DISC1Q9NRI5 854 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 ANAPC7Q9UJX3 599 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 PCDHA4Q9UN74 947 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 GDAQ9Y2T3 454 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 UBN2Q6ZU65 1347 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 USP31Q70CQ4 1352 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 TMEM120BA0PK00 339 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 H7C1W4 665 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 FGFR4P22455 802 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 PDIA2Q13087 525 aaKnown RBP13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 PABPC4Q13310 644 aaKnown RBP eCLIP13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 DLGAP5Q15398 846 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 FAM83BQ5T0W9 1011 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 SUSD4Q5VX71 490 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 ZBTB8OSQ8IWT0 167 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 SLC13A1Q9BZW2 595 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 PCDHB6Q9Y5E3 794 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 KPNA4O00629 521 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 RHOBTB1O94844 696 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 COPB2P35606 906 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 BRDTQ58F21 947 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 XKR9Q5GH70 373 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 PLEKHA7Q6IQ23 1121 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 PLEKHM3Q6ZWE6 761 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 PATL1Q86TB9 770 aaKnown RBP13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 FAM81AQ8TBF8 368 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 SUGCTQ9HAC7 445 aa13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 TMA7Q9Y2S6 64 aaKnown RBP13.92□□□□□ -0.18
PCDHGA3-201ENST00000253812 PALLDQ8WX93 1383 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms