RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 TSGA10Q9BZW7 698 aa25.4■■□□□ 1.66
SYNGR3-201ENST00000248121 MACROD2A1Z1Q3 448 aa25.4■■□□□ 1.66
SYNGR3-201ENST00000248121 ADRB2P07550 413 aa25.4■■□□□ 1.66
SYNGR3-201ENST00000248121 CNGA1P29973 690 aa25.4■■□□□ 1.66
SYNGR3-201ENST00000248121 MAGEA1P43355 309 aa25.4■■□□□ 1.66
SYNGR3-201ENST00000248121 ENOX2Q16206 610 aaKnown RBP25.4■■□□□ 1.66
SYNGR3-201ENST00000248121 MSL3Q8N5Y2 521 aaKnown RBP25.4■■□□□ 1.66
SYNGR3-201ENST00000248121 LMO3Q8TAP4 145 aa25.4■■□□□ 1.66
SYNGR3-201ENST00000248121 SOCS4Q8WXH5 440 aa25.4■■□□□ 1.66
SYNGR3-201ENST00000248121 BBXQ8WY36 941 aaPredicted RBP25.4■■□□□ 1.66
SYNGR3-201ENST00000248121 NRBP2Q9NSY0 501 aa25.4■■□□□ 1.66
SYNGR3-201ENST00000248121 EXOC7Q9UPT5 735 aa25.4■■□□□ 1.66
SYNGR3-201ENST00000248121 PJA2O43164 708 aa25.39■■□□□ 1.65
SYNGR3-201ENST00000248121 VAMP7P51809 220 aa25.39■■□□□ 1.65
SYNGR3-201ENST00000248121 MYL7Q01449 175 aa25.39■■□□□ 1.65
SYNGR3-201ENST00000248121 PPP3CAQ08209 521 aa25.39■■□□□ 1.65
SYNGR3-201ENST00000248121 EHBP1Q8NDI1 1231 aa25.39■■□□□ 1.65
SYNGR3-201ENST00000248121 OR6J1Q8NGC5 347 aa25.39■■□□□ 1.65
SYNGR3-201ENST00000248121 ARHGAP28Q9P2N2 729 aa25.39■■□□□ 1.65
SYNGR3-201ENST00000248121 MYH10P35580 1976 aa25.39■■□□□ 1.65
SYNGR3-201ENST00000248121 A0A087X0T9 212 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 GOLGA8IPA6NC78 632 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 GOLGA8JA6NMD2 632 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 EFCAB8A8MWE9 144 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 ENC1O14682 589 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 MAPK13O15264 365 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 FAM228BP0C875 321 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 KRT13P13646 458 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 BRCA2P51587 3418 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 MCCD1P59942 119 aaPredicted RBP25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 TNFAIP2Q03169 654 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 PTK2Q05397 1052 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 SLC18A3Q16572 532 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 INTS2Q9H0H0 1204 aaKnown RBP25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 SMARCAD1Q9H4L7 1026 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 SALL4Q9UJQ4 1053 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 TRPC6Q9Y210 931 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 MMP3P08254 477 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 PNMA6AP0CW24 399 aaPredicted RBP25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 GLRA2P23416 452 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 MKRN4PQ13434 485 aaPredicted RBP25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 ZNF571Q7Z3V5 609 aaPredicted RBP25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 SLC7A3Q8WY07 619 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 SECISBP2LQ93073 1101 aaKnown RBP25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 C16orf70Q9BSU1 422 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 GNEQ9Y223 722 aaKnown RBP25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 CAPN6Q9Y6Q1 641 aa25.38■■□□□ 1.65
SYNGR3-201ENST00000248121 ATP1A1P05023 1023 aaKnown RBP25.37■■□□□ 1.65
SYNGR3-201ENST00000248121 PRKCIP41743 596 aa25.37■■□□□ 1.65
SYNGR3-201ENST00000248121 IQSEC1Q6DN90 963 aa25.37■■□□□ 1.65
SYNGR3-201ENST00000248121 CBWD2Q8IUF1 395 aa25.37■■□□□ 1.65
SYNGR3-201ENST00000248121 LRRC71Q8N4P6 559 aa25.37■■□□□ 1.65
SYNGR3-201ENST00000248121 PPP1R13LQ8WUF5 828 aa25.37■■□□□ 1.65
SYNGR3-201ENST00000248121 FAM167AQ96KS9 214 aa25.37■■□□□ 1.65
SYNGR3-201ENST00000248121 HDAC6Q9UBN7 1215 aa25.37■■□□□ 1.65
SYNGR3-201ENST00000248121 ADAMTS1Q9UHI8 967 aa25.37■■□□□ 1.65
SYNGR3-201ENST00000248121 USP20Q9Y2K6 914 aa25.37■■□□□ 1.65
SYNGR3-201ENST00000248121 LRRN2O75325 713 aa25.36■■□□□ 1.65
SYNGR3-201ENST00000248121 ALDH1A1P00352 501 aa25.36■■□□□ 1.65
SYNGR3-201ENST00000248121 ARL2P36404 184 aa25.36■■□□□ 1.65
SYNGR3-201ENST00000248121 RSRC2Q7L4I2 434 aaKnown RBP25.36■■□□□ 1.65
SYNGR3-201ENST00000248121 SAAL1Q96ER3 474 aa25.36■■□□□ 1.65
SYNGR3-201ENST00000248121 GPR88Q9GZN0 384 aa25.36■■□□□ 1.65
SYNGR3-201ENST00000248121 MAFO75444 373 aaPredicted RBP25.36■■□□□ 1.65
SYNGR3-201ENST00000248121 FCGRTP55899 365 aa25.36■■□□□ 1.65
SYNGR3-201ENST00000248121 TUBB2AQ13885 445 aa25.36■■□□□ 1.65
SYNGR3-201ENST00000248121 TRAPPC11Q7Z392 1133 aa25.36■■□□□ 1.65
SYNGR3-201ENST00000248121 TRPV1Q8NER1 839 aa25.36■■□□□ 1.65
SYNGR3-201ENST00000248121 TRIB2Q92519 343 aa25.36■■□□□ 1.65
SYNGR3-201ENST00000248121 TUBB2BQ9BVA1 445 aa25.36■■□□□ 1.65
SYNGR3-201ENST00000248121 DYNC1LI2O43237 492 aaPredicted RBP25.35■■□□□ 1.65
SYNGR3-201ENST00000248121 PRKCZQ05513 592 aa25.35■■□□□ 1.65
SYNGR3-201ENST00000248121 SNRNP35Q16560 246 aaKnown RBP25.35■■□□□ 1.65
SYNGR3-201ENST00000248121 UBXN4Q92575 508 aa25.35■■□□□ 1.65
SYNGR3-201ENST00000248121 IFT74Q96LB3 600 aa25.35■■□□□ 1.65
SYNGR3-201ENST00000248121 ERAP1Q9NZ08 941 aa25.35■■□□□ 1.65
SYNGR3-201ENST00000248121 DNAJC12Q9UKB3 198 aa25.35■■□□□ 1.65
SYNGR3-201ENST00000248121 GJB1P08034 283 aa25.35■■□□□ 1.65
SYNGR3-201ENST00000248121 RFC5P40937 340 aa25.35■■□□□ 1.65
SYNGR3-201ENST00000248121 GCLMP48507 274 aa25.35■■□□□ 1.65
SYNGR3-201ENST00000248121 PAPD7Q5XG87 772 aaKnown RBP25.35■■□□□ 1.65
SYNGR3-201ENST00000248121 PHLDB3Q6NSJ2 640 aa25.35■■□□□ 1.65
SYNGR3-201ENST00000248121 PDCL2Q8N4E4 241 aa25.35■■□□□ 1.65
SYNGR3-201ENST00000248121 FBXL18Q96ME1 805 aa25.35■■□□□ 1.65
SYNGR3-201ENST00000248121 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.35■■□□□ 1.65
SYNGR3-201ENST00000248121 SUGCTQ9HAC7 445 aa25.35■■□□□ 1.65
SYNGR3-201ENST00000248121 APEX2Q9UBZ4 518 aa25.35■■□□□ 1.65
SYNGR3-201ENST00000248121 F8VZ95 297 aa25.34■■□□□ 1.65
SYNGR3-201ENST00000248121 TRPA1O75762 1119 aa25.34■■□□□ 1.65
SYNGR3-201ENST00000248121 MOCS3O95396 460 aa25.34■■□□□ 1.65
SYNGR3-201ENST00000248121 VEGFBP49765 207 aa25.34■■□□□ 1.65
SYNGR3-201ENST00000248121 FLT3LGP49771 235 aa25.34■■□□□ 1.65
SYNGR3-201ENST00000248121 IGBP1P78318 339 aa25.34■■□□□ 1.65
SYNGR3-201ENST00000248121 TRIM32Q13049 653 aa25.34■■□□□ 1.65
SYNGR3-201ENST00000248121 EPC2Q52LR7 807 aa25.34■■□□□ 1.65
SYNGR3-201ENST00000248121 SRGAP1Q7Z6B7 1085 aa25.34■■□□□ 1.65
SYNGR3-201ENST00000248121 OLIG1Q8TAK6 271 aa25.34■■□□□ 1.65
SYNGR3-201ENST00000248121 STK33Q9BYT3 514 aa25.34■■□□□ 1.65
SYNGR3-201ENST00000248121 BZW2Q9Y6E2 419 aaKnown RBP25.34■■□□□ 1.65
SYNGR3-201ENST00000248121 EDN1P05305 212 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms