RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 PGRMC1O00264 195 aaKnown RBP16.35■□□□□ 0.21
DDX49-201ENST00000247003 CEP104O60308 925 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 LIG4P49917 911 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 SOX10P56693 466 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 C1orf220Q5T0J3 134 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 SEPT14Q6ZU15 432 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 NCAPG2Q86XI2 1143 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 GSPT2Q8IYD1 628 aaKnown RBP16.35■□□□□ 0.21
DDX49-201ENST00000247003 PROCA1Q8NCQ7 364 aaPredicted RBP16.35■□□□□ 0.21
DDX49-201ENST00000247003 ZSWIM2Q8NEG5 633 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 SLC35G2Q8TBE7 412 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 PLEKHO2Q8TD55 490 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 ACTRT1Q8TDG2 376 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 PARD3BQ8TEW8 1205 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 NT5C1BQ96P26 610 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 KIAA1586Q9HCI6 787 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 KIAA0391O15091 583 aaKnown RBP16.34■□□□□ 0.21
DDX49-201ENST00000247003 NF2P35240 595 aa16.34■□□□□ 0.21
DDX49-201ENST00000247003 SLC7A5Q01650 507 aa16.34■□□□□ 0.21
DDX49-201ENST00000247003 CYP24A1Q07973 514 aa16.34■□□□□ 0.21
DDX49-201ENST00000247003 EMBQ6PCB8 327 aa16.34■□□□□ 0.21
DDX49-201ENST00000247003 SLFN11Q7Z7L1 901 aa16.34■□□□□ 0.21
DDX49-201ENST00000247003 FBXL13Q8NEE6 735 aa16.34■□□□□ 0.21
DDX49-201ENST00000247003 AENQ8WTP8 325 aaKnown RBP16.34■□□□□ 0.21
DDX49-201ENST00000247003 SLC7A3Q8WY07 619 aa16.34■□□□□ 0.21
DDX49-201ENST00000247003 FAM81BQ96LP2 452 aa16.34■□□□□ 0.21
DDX49-201ENST00000247003 FBXL18Q96ME1 805 aa16.34■□□□□ 0.21
DDX49-201ENST00000247003 KRT12Q99456 494 aa16.34■□□□□ 0.21
DDX49-201ENST00000247003 GOLPH3Q9H4A6 298 aa16.34■□□□□ 0.21
DDX49-201ENST00000247003 XPNPEP1Q9NQW7 623 aa16.34■□□□□ 0.21
DDX49-201ENST00000247003 PDLIM7Q9NR12 457 aa16.34■□□□□ 0.21
DDX49-201ENST00000247003 DMGDHQ9UI17 866 aaKnown RBP16.34■□□□□ 0.21
DDX49-201ENST00000247003 PAPPA2Q9BXP8 1791 aa16.34■□□□□ 0.21
DDX49-201ENST00000247003 HEXIM1O94992 359 aaKnown RBP16.33■□□□□ 0.21
DDX49-201ENST00000247003 MYBL2P10244 700 aa16.33■□□□□ 0.21
DDX49-201ENST00000247003 PDE6CP51160 858 aa16.33■□□□□ 0.21
DDX49-201ENST00000247003 MCCD1P59942 119 aaPredicted RBP16.33■□□□□ 0.21
DDX49-201ENST00000247003 CNTN2Q02246 1040 aa16.33■□□□□ 0.21
DDX49-201ENST00000247003 FAM160B1Q5W0V3 765 aa16.33■□□□□ 0.21
DDX49-201ENST00000247003 RPUSD2Q8IZ73 545 aaKnown RBP16.33■□□□□ 0.21
DDX49-201ENST00000247003 GOLGA6L1Q8N7Z2 621 aa16.33■□□□□ 0.21
DDX49-201ENST00000247003 HDAC7Q8WUI4 952 aa16.33■□□□□ 0.21
DDX49-201ENST00000247003 MFSD14AQ96MC6 490 aa16.33■□□□□ 0.21
DDX49-201ENST00000247003 SPATC1LQ9H0A9 340 aa16.33■□□□□ 0.21
DDX49-201ENST00000247003 VPS18Q9P253 973 aa16.33■□□□□ 0.21
DDX49-201ENST00000247003 ARHGAP28Q9P2N2 729 aa16.33■□□□□ 0.21
DDX49-201ENST00000247003 HPCAL4Q9UM19 191 aa16.33■□□□□ 0.21
DDX49-201ENST00000247003 DIS3Q9Y2L1 958 aaKnown RBP16.33■□□□□ 0.21
DDX49-201ENST00000247003 MAFBQ9Y5Q3 323 aaPredicted RBP16.33■□□□□ 0.21
DDX49-201ENST00000247003 POLR2AP24928 1970 aaKnown RBP16.33■□□□□ 0.2
DDX49-201ENST00000247003 ADGRA3Q8IWK6 1321 aa16.33■□□□□ 0.2
DDX49-201ENST00000247003 SBF1O95248 1867 aa16.33■□□□□ 0.2
DDX49-201ENST00000247003 ZNF233A6NK53 670 aa16.33■□□□□ 0.2
DDX49-201ENST00000247003 DDNO94850 711 aaPredicted RBP16.33■□□□□ 0.2
DDX49-201ENST00000247003 DLATP10515 647 aaKnown RBP16.33■□□□□ 0.2
DDX49-201ENST00000247003 GPC3P51654 580 aa16.33■□□□□ 0.2
DDX49-201ENST00000247003 RNASE9P60153 205 aaKnown RBP16.33■□□□□ 0.2
DDX49-201ENST00000247003 PAK2Q13177 524 aa16.33■□□□□ 0.2
DDX49-201ENST00000247003 NEDD9Q14511 834 aa16.33■□□□□ 0.2
DDX49-201ENST00000247003 SLC39A4Q6P5W5 647 aa16.33■□□□□ 0.2
DDX49-201ENST00000247003 NT5DC3Q86UY8 548 aa16.33■□□□□ 0.2
DDX49-201ENST00000247003 OLIG1Q8TAK6 271 aa16.33■□□□□ 0.2
DDX49-201ENST00000247003 DEPTORQ8TB45 409 aa16.33■□□□□ 0.2
DDX49-201ENST00000247003 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.33■□□□□ 0.25e-12■■■□□ 17.6
DDX49-201ENST00000247003 SYT17Q9BSW7 474 aa16.33■□□□□ 0.2
DDX49-201ENST00000247003 THAP2Q9H0W7 228 aa16.33■□□□□ 0.2
DDX49-201ENST00000247003 OSGEPQ9NPF4 335 aa16.33■□□□□ 0.2
DDX49-201ENST00000247003 RAB20Q9NX57 234 aa16.33■□□□□ 0.2
DDX49-201ENST00000247003 COQ4Q9Y3A0 265 aa16.33■□□□□ 0.2
DDX49-201ENST00000247003 NOC2LQ9Y3T9 749 aaKnown RBP16.33■□□□□ 0.2
DDX49-201ENST00000247003 SYNGAP1Q96PV0 1343 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 ADM5C9JUS6 153 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 CCDC188H7C350 402 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 ATG7O95352 703 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 RFC5P40937 340 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 NAMPTP43490 491 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 AARSP49588 968 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDX49-201ENST00000247003 PPATQ06203 517 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 CLUL1Q15846 466 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 PTPROQ16827 1216 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 SND1Q7KZF4 910 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDX49-201ENST00000247003 ENOSF1Q7L5Y1 443 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 SLC20A1Q8WUM9 679 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 GDAP1L1Q96MZ0 367 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 FNBP1Q96RU3 617 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 FAM213AQ9BRX8 229 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 PAGR1Q9BTK6 254 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 ELP3Q9H9T3 547 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 NRBP2Q9NSY0 501 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 BTBD7Q9P203 1132 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 STXBP5LQ9Y2K9 1186 aa16.32■□□□□ 0.2
DDX49-201ENST00000247003 LRRIQ4A6NIV6 560 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 EXTL3O43909 919 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 BUB1BO60566 1050 aaPredicted RBP16.31■□□□□ 0.2
DDX49-201ENST00000247003 ZC3H11AO75152 810 aaKnown RBP eCLIP16.31■□□□□ 0.2
DDX49-201ENST00000247003 RTN2O75298 545 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 UBA1P22314 1058 aaKnown RBP16.31■□□□□ 0.2
DDX49-201ENST00000247003 COPB2P35606 906 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 SP2Q02086 613 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 NNTQ13423 1086 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms