RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 EXTL3O43909 919 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 ZEB2O60315 1214 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 C6orf222P0C671 652 aaPredicted RBP20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 SMIM10L2AP0DMW4 78 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 SMIM10L2BP0DMW5 78 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 RARBP10826 455 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 PSEN2P49810 448 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 LBX1P52954 281 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 PTENP60484 403 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 POLR2FP61218 127 aaKnown RBP20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 MYL7Q01449 175 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 DNTTIP2Q5QJE6 756 aaKnown RBP20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 RRAGAQ7L523 313 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 CBWD2Q8IUF1 395 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 TRPV1Q8NER1 839 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 FBXL18Q96ME1 805 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 TCHPQ9BT92 498 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 PLCB1Q9NQ66 1216 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 TRMT1Q9NXH9 659 aaKnown RBP20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 ANKFY1Q9P2R3 1169 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 SRRDQ9UH36 339 aa20.38■□□□□ 0.85
TNFSF9-201ENST00000245817 CLDN3O15551 220 aa20.37■□□□□ 0.85
TNFSF9-201ENST00000245817 SEPT4O43236 478 aa20.37■□□□□ 0.85
TNFSF9-201ENST00000245817 GJB1P08034 283 aa20.37■□□□□ 0.85
TNFSF9-201ENST00000245817 FECHP22830 423 aa20.37■□□□□ 0.85
TNFSF9-201ENST00000245817 PON1P27169 355 aa20.37■□□□□ 0.85
TNFSF9-201ENST00000245817 NFRKBQ6P4R8 1299 aa20.37■□□□□ 0.85
TNFSF9-201ENST00000245817 CCAR2Q8N163 923 aaKnown RBP20.37■□□□□ 0.85
TNFSF9-201ENST00000245817 KAT2BQ92831 832 aa20.37■□□□□ 0.85
TNFSF9-201ENST00000245817 MSTO1Q9BUK6 570 aa20.37■□□□□ 0.85
TNFSF9-201ENST00000245817 NFKBIZQ9BYH8 718 aa20.37■□□□□ 0.85
TNFSF9-201ENST00000245817 CCDC113Q9H0I3 377 aa20.37■□□□□ 0.85
TNFSF9-201ENST00000245817 KCND1Q9NSA2 647 aa20.37■□□□□ 0.85
TNFSF9-201ENST00000245817 SOWAHDA6NJG2 315 aa20.36■□□□□ 0.85
TNFSF9-201ENST00000245817 EPHB6O15197 1021 aa20.36■□□□□ 0.85
TNFSF9-201ENST00000245817 P4HA2O15460 535 aa20.36■□□□□ 0.85
TNFSF9-201ENST00000245817 SLC9A1P19634 815 aa20.36■□□□□ 0.85
TNFSF9-201ENST00000245817 CDC42EP1Q00587 391 aa20.36■□□□□ 0.85
TNFSF9-201ENST00000245817 CACNB2Q08289 660 aaPredicted RBP20.36■□□□□ 0.85
TNFSF9-201ENST00000245817 LINC01465Q8N7H1 131 aa20.36■□□□□ 0.85
TNFSF9-201ENST00000245817 ZSWIM2Q8NEG5 633 aa20.36■□□□□ 0.85
TNFSF9-201ENST00000245817 TMC2Q8TDI7 906 aa20.36■□□□□ 0.85
TNFSF9-201ENST00000245817 NLRP7Q8WX94 980 aa20.36■□□□□ 0.85
TNFSF9-201ENST00000245817 CCDC127Q96BQ5 260 aa20.36■□□□□ 0.85
TNFSF9-201ENST00000245817 ZNF668Q96K58 619 aaPredicted RBP20.36■□□□□ 0.85
TNFSF9-201ENST00000245817 NLRC4Q9NPP4 1024 aa20.36■□□□□ 0.85
TNFSF9-201ENST00000245817 USP20Q9Y2K6 914 aa20.36■□□□□ 0.85
TNFSF9-201ENST00000245817 ACKR2O00590 384 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 MSCO60682 206 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 TOM1L1O75674 476 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 VTNP04004 478 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 ADRB2P07550 413 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 GJA9P57773 515 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 DLG4P78352 724 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 CAP1Q01518 475 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 ENPEPQ07075 957 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 CYP24A1Q07973 514 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 PRPF4BQ13523 1007 aaKnown RBP20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 GNASQ5JWF2 1037 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 MARCH8Q5T0T0 291 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 E4F1Q66K89 784 aaPredicted RBP20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 RAET1EQ8TD07 263 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 LMBR1Q8WVP7 490 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 MFSD14AQ96MC6 490 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 PRMT7Q9NVM4 692 aaPredicted RBP20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 NOL4O94818 638 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 GNAT1P11488 350 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 IRX5P78411 483 aaPredicted RBP20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 CBWD6Q4V339 395 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 CBWD3Q5JTY5 395 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 CBWD5Q5RIA9 395 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 KLHDC7AQ5VTJ3 777 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 C7orf31Q8N865 590 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 PARD3BQ8TEW8 1205 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 ZBTB45Q96K62 511 aaPredicted RBP20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 FNBP1Q96RU3 617 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 ACO2Q99798 780 aaKnown RBP20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 FZD8Q9H461 694 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 PLAGL2Q9UPG8 496 aa20.35■□□□□ 0.85
TNFSF9-201ENST00000245817 A0A087WZ62 844 aa20.34■□□□□ 0.85
TNFSF9-201ENST00000245817 A0A0B4J269 797 aa20.34■□□□□ 0.85
TNFSF9-201ENST00000245817 LRRC53A6NM62 1247 aa20.34■□□□□ 0.85
TNFSF9-201ENST00000245817 HAS3O00219 553 aa20.34■□□□□ 0.85
TNFSF9-201ENST00000245817 ACTN1P12814 892 aa20.34■□□□□ 0.85
TNFSF9-201ENST00000245817 PRKAR2AP13861 404 aaKnown RBP20.34■□□□□ 0.85
TNFSF9-201ENST00000245817 ELNP15502 786 aa20.34■□□□□ 0.85
TNFSF9-201ENST00000245817 GCLMP48507 274 aa20.34■□□□□ 0.85
TNFSF9-201ENST00000245817 PURAQ00577 322 aaKnown RBP20.34■□□□□ 0.85
TNFSF9-201ENST00000245817 MEA1Q16626 185 aa20.34■□□□□ 0.85
TNFSF9-201ENST00000245817 SFMBT2Q5VUG0 894 aa20.34■□□□□ 0.85
TNFSF9-201ENST00000245817 PDXDC1Q6P996 788 aa20.34■□□□□ 0.85
TNFSF9-201ENST00000245817 SPAG5Q96R06 1193 aa20.34■□□□□ 0.85
TNFSF9-201ENST00000245817 PPP1R16BQ96T49 567 aa20.34■□□□□ 0.85
TNFSF9-201ENST00000245817 FDXACB1Q9BRP7 624 aaPredicted RBP20.34■□□□□ 0.85
TNFSF9-201ENST00000245817 TRIM17Q9Y577 477 aa20.34■□□□□ 0.85
TNFSF9-201ENST00000245817 ZSWIM8A7E2V4 1837 aa20.34■□□□□ 0.85
TNFSF9-201ENST00000245817 HMGCRP04035 888 aa20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 CCDC175P0C221 793 aa20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 HARSP12081 509 aaKnown RBP20.33■□□□□ 0.85
TNFSF9-201ENST00000245817 UCHL3P15374 230 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms