RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 ABTB1Q969K4 478 aaPredicted RBP12.35□□□□□ -0.43
SOX9-201ENST00000245479 CEP170P1Q96L14 293 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 FGFR1OP2Q9NVK5 253 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 TAS2R14Q9NYV8 317 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 STOML1Q9UBI4 398 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 MARF1Q9Y4F3 1742 aaKnown RBP12.35□□□□□ -0.43
SOX9-201ENST00000245479 PIK3R2O00459 728 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 CREB3O43889 395 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 TLR2O60603 784 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 CSDE1O75534 798 aaKnown RBP12.35□□□□□ -0.43
SOX9-201ENST00000245479 KRT19P08727 400 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 BRAFP15056 766 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 GSCP56915 257 aaPredicted RBP12.35□□□□□ -0.43
SOX9-201ENST00000245479 SCARA5Q6ZMJ2 495 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 SRRM1Q8IYB3 904 aaKnown RBP12.35□□□□□ -0.43
SOX9-201ENST00000245479 ANKRD35Q8N283 1001 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 DHX38Q92620 1227 aaKnown RBP12.35□□□□□ -0.43
SOX9-201ENST00000245479 ACSF2Q96CM8 615 aaPredicted RBP12.35□□□□□ -0.43
SOX9-201ENST00000245479 DNAJC19Q96DA6 116 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 FGD4Q96M96 766 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 FNBP1Q96RU3 617 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 P2RX7Q99572 595 aaKnown RBP12.35□□□□□ -0.43
SOX9-201ENST00000245479 TEKT3Q9BXF9 490 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 SEPT9Q9UHD8 586 aaPredicted RBP12.35□□□□□ -0.43
SOX9-201ENST00000245479 C15orf41Q9Y2V0 281 aa12.35□□□□□ -0.43
SOX9-201ENST00000245479 AP1G2O75843 785 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 IL1R1P14778 569 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 DLG4P78352 724 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 TMED2Q15363 201 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 ARSHQ5FYA8 562 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 LLGL2Q6P1M3 1020 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 TMEM154Q6P9G4 183 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 NIM1KQ8IY84 436 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 CHURC1Q8WUH1 139 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 TEKT4Q8WW24 435 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 SH3GL2Q99962 352 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 DLGAP2Q9P1A6 1054 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.34□□□□□ -0.43
SOX9-201ENST00000245479 MEIS2O14770 477 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 MAPK13O15264 365 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 FGRP09769 529 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 CUL3Q13618 768 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 KLHDC7AQ5VTJ3 777 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 RINT1Q6NUQ1 792 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 ERGIC2Q96RQ1 377 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 TGS1Q96RS0 853 aaKnown RBP12.34□□□□□ -0.43
SOX9-201ENST00000245479 SLITRK6Q9H5Y7 841 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 FOXN3O00409 490 aaPredicted RBP12.34□□□□□ -0.43
SOX9-201ENST00000245479 FTLP02792 175 aaPredicted RBP12.34□□□□□ -0.43
SOX9-201ENST00000245479 GNAT1P11488 350 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 NQO1P15559 274 aaKnown RBP12.34□□□□□ -0.43
SOX9-201ENST00000245479 DYNLT1P63172 113 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 COG7P83436 770 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 ITIH3Q06033 890 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 GRM1Q13255 1194 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 PDIA5Q14554 519 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 RRP1BQ14684 758 aaKnown RBP12.34□□□□□ -0.43
SOX9-201ENST00000245479 C10orf76Q5T2E6 689 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 LRRC55Q6ZSA7 311 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 SH3BP5LQ7L8J4 393 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 SPATA21Q7Z572 469 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 C3orf20Q8ND61 904 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 C1orf54Q8WWF1 131 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 LRRC37BQ96QE4 947 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 RMDN3Q96TC7 470 aa12.34□□□□□ -0.43
SOX9-201ENST00000245479 SSU72P8A0A1W2PR75 194 aa12.33□□□□□ -0.43
SOX9-201ENST00000245479 MAP3K7O43318 606 aa12.33□□□□□ -0.43
SOX9-201ENST00000245479 PIAS1O75925 651 aa12.33□□□□□ -0.43
SOX9-201ENST00000245479 ATF7P17544 494 aaPredicted RBP12.33□□□□□ -0.43
SOX9-201ENST00000245479 FGFR4P22455 802 aa12.33□□□□□ -0.43
SOX9-201ENST00000245479 PON1P27169 355 aa12.33□□□□□ -0.43
SOX9-201ENST00000245479 ACOT2P49753 483 aa12.33□□□□□ -0.43
SOX9-201ENST00000245479 RASA3Q14644 834 aa12.33□□□□□ -0.43
SOX9-201ENST00000245479 SLC18A3Q16572 532 aa12.33□□□□□ -0.43
SOX9-201ENST00000245479 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.33□□□□□ -0.43
SOX9-201ENST00000245479 KDM4CQ9H3R0 1056 aa12.33□□□□□ -0.43
SOX9-201ENST00000245479 PAPOLBQ9NRJ5 636 aaKnown RBP12.33□□□□□ -0.43
SOX9-201ENST00000245479 DBR1Q9UK59 544 aaKnown RBP12.33□□□□□ -0.43
SOX9-201ENST00000245479 G3BP2Q9UN86 482 aaKnown RBP12.33□□□□□ -0.43
SOX9-201ENST00000245479 SIK3Q9Y2K2 1263 aa12.33□□□□□ -0.43
SOX9-201ENST00000245479 ARL2BPQ9Y2Y0 163 aa12.33□□□□□ -0.43
SOX9-201ENST00000245479 hCG_2014768A0A024R1R8 64 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 ARHGAP42A6NI28 874 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 CD19P15391 556 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 FXR2P51116 673 aaKnown RBP eCLIP12.33□□□□□ -0.44
SOX9-201ENST00000245479 CEP55Q53EZ4 464 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 PPP1R21Q6ZMI0 780 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 ZNF653Q96CK0 615 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 THAP2Q9H0W7 228 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 RNF19AQ9NV58 838 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 TTC7AQ9ULT0 858 aaPredicted RBP12.33□□□□□ -0.44
SOX9-201ENST00000245479 WDR91A4D1P6 747 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 UBOX5O94941 541 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 ERFP50548 548 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 ELF3P78545 371 aaPredicted RBP12.33□□□□□ -0.44
SOX9-201ENST00000245479 TRAF1Q13077 416 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 MTMR2Q13614 643 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 PDCD2Q16342 344 aaPredicted RBP12.33□□□□□ -0.44
SOX9-201ENST00000245479 NLRX1Q86UT6 975 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 PALB2Q86YC2 1186 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms