RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 HSPA9P38646 679 aaKnown RBP9.91□□□□□ -0.82
COL21A1-201ENST00000244728 CCNA1P78396 465 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 GRB10Q13322 594 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 SLC29A2Q14542 456 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 SWT1Q5T5J6 900 aaKnown RBP9.91□□□□□ -0.82
COL21A1-201ENST00000244728 MEI1Q5TIA1 1274 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 TGS1Q96RS0 853 aaKnown RBP9.91□□□□□ -0.82
COL21A1-201ENST00000244728 FGFR1OP2Q9NVK5 253 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 NAGPAQ9UK23 515 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 MAD1L1Q9Y6D9 718 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 ENO4A6NNW6 628 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 P4HBP07237 508 aaKnown RBP9.9□□□□□ -0.82
COL21A1-201ENST00000244728 BPIFB4P59827 614 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 ORC2Q13416 577 aaPredicted RBP9.9□□□□□ -0.82
COL21A1-201ENST00000244728 PDIA5Q14554 519 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 STXBP2Q15833 593 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 IL17AQ16552 155 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 HADHQ16836 314 aaKnown RBP9.9□□□□□ -0.82
COL21A1-201ENST00000244728 KCTD19Q17RG1 926 aaPredicted RBP9.9□□□□□ -0.82
COL21A1-201ENST00000244728 RASIP1Q5U651 963 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 NME8Q8N427 588 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 SLC35G2Q8TBE7 412 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 KAT2BQ92831 832 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 ZKSCAN4Q969J2 545 aaPredicted RBP9.9□□□□□ -0.82
COL21A1-201ENST00000244728 MTRQ99707 1265 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 TRIM4Q9C037 500 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 HOXC10Q9NYD6 342 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 MYO3BQ8WXR4 1341 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 DDTLA6NHG4 134 aaPredicted RBP9.9□□□□□ -0.82
COL21A1-201ENST00000244728 TXNDC9O14530 226 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 CLDN3O15551 220 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 CAND2O75155 1236 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 AGTP01019 485 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 SAT1P21673 171 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 NPEPPSP55786 919 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 POLE2P56282 527 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 RWDD2BP57060 319 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 DHX34Q14147 1143 aaKnown RBP9.9□□□□□ -0.82
COL21A1-201ENST00000244728 HHIPL2Q6UWX4 724 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 HAUS6Q7Z4H7 955 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 SYN2Q92777 582 aaPredicted RBP9.9□□□□□ -0.82
COL21A1-201ENST00000244728 REEP2Q9BRK0 252 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 GDF3Q9NR23 364 aa9.9□□□□□ -0.82
COL21A1-201ENST00000244728 USP15Q9Y4E8 981 aaPredicted RBP9.9□□□□□ -0.82
COL21A1-201ENST00000244728 KDM4FA0A1W2PPD8 638 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 RASA4BC9J798 803 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 RASA4O43374 803 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 CPP00450 1065 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 FTLP02792 175 aaPredicted RBP9.9□□□□□ -0.83
COL21A1-201ENST00000244728 ITGA4P13612 1032 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 ZNF844Q08AG5 666 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 CDO1Q16878 200 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 GEN1Q17RS7 908 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 ANKRD20A8PQ5CZ79 823 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 CFAP157Q5JU67 520 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 SLC10A5Q5PT55 438 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 JAMLQ86YT9 394 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 CFAP61Q8NHU2 1237 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 TPCN2Q8NHX9 752 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 TSC22D3Q99576 134 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 ERP44Q9BS26 406 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 SLC5A4Q9NY91 659 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 DONSONQ9NYP3 566 aa9.9□□□□□ -0.83
COL21A1-201ENST00000244728 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.89□□□□□ -0.83
COL21A1-201ENST00000244728 SGK1O00141 431 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 STAMBPO95630 424 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 PPP4CP60510 307 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 YWHAEP62258 255 aaKnown RBP9.89□□□□□ -0.83
COL21A1-201ENST00000244728 LONRF1Q17RB8 773 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 ANGEL2Q5VTE6 544 aaKnown RBP9.89□□□□□ -0.83
COL21A1-201ENST00000244728 PHLDB3Q6NSJ2 640 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 TMEM270Q6UE05 265 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 FRMD5Q7Z6J6 570 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 FUKQ8N0W3 1084 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 BBOF1Q8ND07 529 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 NDC80O14777 642 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 MAPK13O15264 365 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 KLRC4O43908 158 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 TFDP1Q14186 410 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 GJB7Q6PEY0 223 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 LRP10Q7Z4F1 713 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 SPATA21Q7Z572 469 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 CCDC110Q8TBZ0 833 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 SREK1Q8WXA9 508 aaKnown RBP9.89□□□□□ -0.83
COL21A1-201ENST00000244728 C11orf70Q9BRQ4 267 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 EMSYQ7Z589 1322 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 IGF2BP3O00425 579 aaKnown RBP eCLIP9.89□□□□□ -0.83
COL21A1-201ENST00000244728 SHOX2O60902 331 aaPredicted RBP9.89□□□□□ -0.83
COL21A1-201ENST00000244728 MYBP10242 640 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 OSBPP22059 807 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 SOX5P35711 763 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 RAD23BP54727 409 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 GPC5P78333 572 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 TRADDQ15628 312 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 PLA2G4FQ68DD2 849 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 TEX2Q8IWB9 1127 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 C1orf54Q8WWF1 131 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 ANKRD36BP1Q96IX9 119 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 RILPQ96NA2 401 aa9.89□□□□□ -0.83
COL21A1-201ENST00000244728 TBC1D22BQ9NU19 505 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms