RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 CYP2C9P11712 490 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 SLC9A1P19634 815 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 PSMC2P35998 433 aaKnown RBP14.09□□□□□ -0.15
HIF3A-201ENST00000244302 LIG4P49917 911 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 DNM2P50570 870 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 MARSP56192 900 aaKnown RBP14.09□□□□□ -0.15
HIF3A-201ENST00000244302 PTENP60484 403 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 MAP2K1Q02750 393 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-201ENST00000244302 MBTD1Q05BQ5 628 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 MXD4Q14582 209 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-201ENST00000244302 PPP2R5AQ15172 486 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 CBWD6Q4V339 395 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 CBWD3Q5JTY5 395 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 CBWD5Q5RIA9 395 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 LMBRD2Q68DH5 695 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-201ENST00000244302 CDCA2Q69YH5 1023 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-201ENST00000244302 GDF6Q6KF10 455 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-201ENST00000244302 FRMD5Q7Z6J6 570 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 CEP120Q8N960 986 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 TC2NQ8N9U0 490 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 CCDC112Q8NEF3 446 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 PXYLP1Q8TE99 480 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 NLRP7Q8WX94 980 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 CCDC127Q96BQ5 260 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 BEGAINQ9BUH8 593 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 TOPORSQ9NS56 1045 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-201ENST00000244302 NRCAMQ92823 1304 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 TTC26A0AVF1 554 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 MBLAC1A4D2B0 266 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-201ENST00000244302 MAGEB2O15479 319 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 PRKCBP05771 671 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 EPB41P11171 864 aaKnown RBP14.09□□□□□ -0.15
HIF3A-201ENST00000244302 SKILP12757 684 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 TNFSF9P41273 254 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 GPC3P51654 580 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 PPP3CAQ08209 521 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 STRN3Q13033 797 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 ALCAMQ13740 583 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 BRDTQ58F21 947 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-201ENST00000244302 FAM47CQ5HY64 1035 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 CRELD2Q6UXH1 353 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-201ENST00000244302 SLC9A9Q8IVB4 645 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 TMEM192Q8IY95 271 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 C7orf31Q8N865 590 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 XXYLT1Q8NBI6 393 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 TMEM40Q8WWA1 233 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 OSMRQ99650 979 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 UNC93B1Q9H1C4 597 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 SIK3Q9Y2K2 1263 aa14.09□□□□□ -0.15
HIF3A-201ENST00000244302 OSTNP61366 133 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 CCZ1BP86790 482 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 CCZ1P86791 482 aaPredicted RBP14.08□□□□□ -0.16
HIF3A-201ENST00000244302 NFIL3Q16649 462 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 AMHR2Q16671 573 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 PCMTD1Q96MG8 357 aaPredicted RBP14.08□□□□□ -0.16
HIF3A-201ENST00000244302 ACO2Q99798 780 aaKnown RBP14.08□□□□□ -0.16
HIF3A-201ENST00000244302 MTG1Q9BT17 334 aaPredicted RBP14.08□□□□□ -0.16
HIF3A-201ENST00000244302 ADAMTS10Q9H324 1103 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 FZD8Q9H461 694 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 PCDH10Q9P2E7 1040 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 CGNQ9P2M7 1197 aaKnown RBP14.08□□□□□ -0.16
HIF3A-201ENST00000244302 FRMD4BQ9Y2L6 1034 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 C17orf102A2RUQ5 167 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 ABLIM1O14639 778 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 GPR32O75388 356 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 MATR3P43243 847 aaKnown RBP eCLIP14.08□□□□□ -0.16
HIF3A-201ENST00000244302 SNRNP35Q16560 246 aaKnown RBP14.08□□□□□ -0.16
HIF3A-201ENST00000244302 DPY19L2P1Q6NXN4 242 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 GJB7Q6PEY0 223 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 VTI1AQ96AJ9 217 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 THSD7BQ9C0I4 1608 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 TMEM134Q9H6X4 195 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 EXOC7Q9UPT5 735 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 PPME1Q9Y570 386 aa14.08□□□□□ -0.16
HIF3A-201ENST00000244302 COL1A2P08123 1366 aa14.07□□□□□ -0.16
HIF3A-201ENST00000244302 RRN3P2A6NIE6 340 aa14.07□□□□□ -0.16
HIF3A-201ENST00000244302 NOL4O94818 638 aa14.07□□□□□ -0.16
HIF3A-201ENST00000244302 GNA14O95837 355 aa14.07□□□□□ -0.16
HIF3A-201ENST00000244302 TMOD1P28289 359 aa14.07□□□□□ -0.16
HIF3A-201ENST00000244302 KCNJ6P48051 423 aa14.07□□□□□ -0.16
HIF3A-201ENST00000244302 GCLMP48507 274 aa14.07□□□□□ -0.16
HIF3A-201ENST00000244302 NCBP1Q09161 790 aaKnown RBP14.07□□□□□ -0.16
HIF3A-201ENST00000244302 MAPK6Q16659 721 aa14.07□□□□□ -0.16
HIF3A-201ENST00000244302 NYAP1Q6ZVC0 841 aa14.07□□□□□ -0.16
HIF3A-201ENST00000244302 C12orf56Q8IXR9 622 aa14.07□□□□□ -0.16
HIF3A-201ENST00000244302 SCLT1Q96NL6 688 aa14.07□□□□□ -0.16
HIF3A-201ENST00000244302 JPH2Q9BR39 696 aaPredicted RBP14.07□□□□□ -0.16
HIF3A-201ENST00000244302 TCHPQ9BT92 498 aa14.07□□□□□ -0.16
HIF3A-201ENST00000244302 SPC25Q9HBM1 224 aa14.07□□□□□ -0.16
HIF3A-201ENST00000244302 RNF19AQ9NV58 838 aa14.07□□□□□ -0.16
HIF3A-201ENST00000244302 AJAP1Q9UKB5 411 aaPredicted RBP14.07□□□□□ -0.16
HIF3A-201ENST00000244302 PTPN22Q9Y2R2 807 aa14.07□□□□□ -0.16
HIF3A-201ENST00000244302 PTPRJQ12913 1337 aa14.06□□□□□ -0.16
HIF3A-201ENST00000244302 A0A0B4J269 797 aa14.06□□□□□ -0.16
HIF3A-201ENST00000244302 SLC16A3O15427 465 aaKnown RBP14.06□□□□□ -0.16
HIF3A-201ENST00000244302 GAS2O43903 313 aaKnown RBP14.06□□□□□ -0.16
HIF3A-201ENST00000244302 TUBB4AP04350 444 aa14.06□□□□□ -0.16
HIF3A-201ENST00000244302 BFSP1Q12934 665 aa14.06□□□□□ -0.16
HIF3A-201ENST00000244302 E4F1Q66K89 784 aaPredicted RBP14.06□□□□□ -0.16
HIF3A-201ENST00000244302 CCDC150Q8NCX0 1101 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms