RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 FGFR4P22455 802 aa9.39□□□□□ -0.91
IFT43-201ENST00000238628 TARSP26639 723 aaKnown RBP9.39□□□□□ -0.91
IFT43-201ENST00000238628 CLCN4P51793 760 aa9.39□□□□□ -0.91
IFT43-201ENST00000238628 POLGP54098 1239 aaPredicted RBP9.39□□□□□ -0.91
IFT43-201ENST00000238628 CYP26C1Q6V0L0 522 aa9.39□□□□□ -0.91
IFT43-201ENST00000238628 GET4Q7L5D6 327 aaPredicted RBP9.39□□□□□ -0.91
IFT43-201ENST00000238628 DDX53Q86TM3 631 aaKnown RBP9.39□□□□□ -0.91
IFT43-201ENST00000238628 ZNF598Q86UK7 904 aaKnown RBP9.39□□□□□ -0.91
IFT43-201ENST00000238628 LRRC71Q8N4P6 559 aa9.39□□□□□ -0.91
IFT43-201ENST00000238628 CMASQ8NFW8 434 aaPredicted RBP9.39□□□□□ -0.91
IFT43-201ENST00000238628 ADAM32Q8TC27 787 aa9.39□□□□□ -0.91
IFT43-201ENST00000238628 SMG7Q92540 1137 aaKnown RBP9.39□□□□□ -0.91
IFT43-201ENST00000238628 FAM167AQ96KS9 214 aa9.39□□□□□ -0.91
IFT43-201ENST00000238628 SCLT1Q96NL6 688 aa9.39□□□□□ -0.91
IFT43-201ENST00000238628 RPP25Q9BUL9 199 aaKnown RBP9.39□□□□□ -0.91
IFT43-201ENST00000238628 PIDD1Q9HB75 910 aa9.39□□□□□ -0.91
IFT43-201ENST00000238628 FAM217BQ9NTX9 383 aaPredicted RBP9.39□□□□□ -0.91
IFT43-201ENST00000238628 BARHL2Q9NY43 387 aa9.39□□□□□ -0.91
IFT43-201ENST00000238628 WASF3Q9UPY6 502 aa9.39□□□□□ -0.91
IFT43-201ENST00000238628 DOCK8Q8NF50 2099 aa9.39□□□□□ -0.91
IFT43-201ENST00000238628 CARNS1A5YM72 827 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 GIPC1O14908 333 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 AXIN1O15169 862 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 ZBTB43O43298 467 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 ZC3H11AO75152 810 aaKnown RBP eCLIP9.38□□□□□ -0.91
IFT43-201ENST00000238628 MYBP10242 640 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 TDGF1P13385 188 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 DARSP14868 501 aaKnown RBP9.38□□□□□ -0.91
IFT43-201ENST00000238628 GPC3P51654 580 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 PFKPQ01813 784 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 NECTIN1Q15223 517 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 CCDC6Q16204 474 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 RTN1Q16799 776 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 CREB3L3Q68CJ9 461 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 ELMSAN1Q6PJG2 1045 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 APOA5Q6Q788 366 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 TPRG1Q6ZUI0 275 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 LINC01465Q8N7H1 131 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 NLRP7Q8WX94 980 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 PHKBQ93100 1093 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 IGSF21Q96ID5 467 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 LSG1Q9H089 658 aaKnown RBP9.38□□□□□ -0.91
IFT43-201ENST00000238628 MAN1C1Q9NR34 630 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 CHST12Q9NRB3 414 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 MRPS17Q9Y2R5 130 aaKnown RBP9.38□□□□□ -0.91
IFT43-201ENST00000238628 COL4A3Q01955 1670 aa9.38□□□□□ -0.91
IFT43-201ENST00000238628 CSDE1O75534 798 aaKnown RBP9.37□□□□□ -0.91
IFT43-201ENST00000238628 OATP04181 439 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 SSBP05455 408 aaKnown RBP eCLIP9.37□□□□□ -0.91
IFT43-201ENST00000238628 GALTP07902 379 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 CNR2P34972 360 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 CDC42EP1Q00587 391 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 SETQ01105 290 aaPredicted RBP9.37□□□□□ -0.91
IFT43-201ENST00000238628 RNASELQ05823 741 aaKnown RBP9.37□□□□□ -0.91
IFT43-201ENST00000238628 ADCY1Q08828 1119 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 FUT2Q10981 343 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 SRSF5Q13243 272 aaKnown RBP9.37□□□□□ -0.91
IFT43-201ENST00000238628 LONRF3Q496Y0 759 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 PRR16Q569H4 304 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 PARM1Q6UWI2 310 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 ZNF852Q6ZMS4 543 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 CEP68Q76N32 757 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 TMEM173Q86WV6 379 aaPredicted RBP9.37□□□□□ -0.91
IFT43-201ENST00000238628 FAM160A2Q8N612 972 aaPredicted RBP9.37□□□□□ -0.91
IFT43-201ENST00000238628 CRYGNQ8WXF5 182 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 FGF14Q92915 247 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 LPPQ93052 612 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 BBC3Q96PG8 261 aaPredicted RBP9.37□□□□□ -0.91
IFT43-201ENST00000238628 GCOM2Q9BZD3 368 aaPredicted RBP9.37□□□□□ -0.91
IFT43-201ENST00000238628 ARRDC1-AS1Q9H2J1 176 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 NRDE2Q9H7Z3 1164 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 DISC1Q9NRI5 854 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 DPP7Q9UHL4 492 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 BRPF3Q9ULD4 1205 aa9.37□□□□□ -0.91
IFT43-201ENST00000238628 DSPP15924 2871 aaKnown RBP9.37□□□□□ -0.91
IFT43-201ENST00000238628 GOLGA8AA7E2F4 631 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 GOLGA8BA8MQT2 603 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 WDR64B1ANS9 1081 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 CHURC1-FNTBB4DL54 471 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 ZNF862O60290 1169 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 SEC24BO95487 1268 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 CNPP09543 421 aaKnown RBP9.36□□□□□ -0.91
IFT43-201ENST00000238628 ZNF806P0C7X5 589 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 SKIP12755 728 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 PHKA2P46019 1235 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 FNTBP49356 437 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 CCR3P51677 355 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 EXOSC10Q01780 885 aaKnown RBP9.36□□□□□ -0.91
IFT43-201ENST00000238628 C19orf57Q0VDD7 668 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 PFKFB3Q16875 520 aaPredicted RBP9.36□□□□□ -0.91
IFT43-201ENST00000238628 COL28A1Q2UY09 1125 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 NOMO2Q5JPE7 1267 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 RNF43Q68DV7 783 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 TWF2Q6IBS0 349 aaKnown RBP9.36□□□□□ -0.91
IFT43-201ENST00000238628 GLIS3Q8NEA6 775 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 RSPH1Q8WYR4 309 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 TCEANC2Q96MN5 208 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 RHOBTB2Q9BYZ6 727 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 INO80BQ9C086 356 aaPredicted RBP9.36□□□□□ -0.91
IFT43-201ENST00000238628 GBP3Q9H0R5 595 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms