RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 SUN1O94901 812 aa16.67■□□□□ 0.26
DDX55-201ENST00000238146 COPS2P61201 443 aa16.67■□□□□ 0.26
DDX55-201ENST00000238146 NUGGCQ68CJ6 796 aa16.67■□□□□ 0.26
DDX55-201ENST00000238146 TRMT10CQ7L0Y3 403 aaKnown RBP16.67■□□□□ 0.26
DDX55-201ENST00000238146 CPNE8Q86YQ8 564 aa16.67■□□□□ 0.26
DDX55-201ENST00000238146 RPGRQ92834 1020 aaKnown RBP16.67■□□□□ 0.26
DDX55-201ENST00000238146 AAASQ9NRG9 546 aa16.67■□□□□ 0.26
DDX55-201ENST00000238146 PASKQ96RG2 1323 aa16.67■□□□□ 0.26
DDX55-201ENST00000238146 CCDC189A1A4V9 331 aa16.67■□□□□ 0.26
DDX55-201ENST00000238146 TP73O15350 636 aa16.67■□□□□ 0.26
DDX55-201ENST00000238146 ZNF746Q6NUN9 644 aaPredicted RBP16.67■□□□□ 0.26
DDX55-201ENST00000238146 KIF2BQ8N4N8 673 aa16.67■□□□□ 0.26
DDX55-201ENST00000238146 GBP7Q8N8V2 638 aaPredicted RBP16.67■□□□□ 0.26
DDX55-201ENST00000238146 RDH13Q8NBN7 331 aa16.67■□□□□ 0.26
DDX55-201ENST00000238146 PRCCQ92733 491 aaPredicted RBP16.67■□□□□ 0.26
DDX55-201ENST00000238146 KLHL29Q96CT2 875 aa16.67■□□□□ 0.26
DDX55-201ENST00000238146 POP1Q99575 1024 aaKnown RBP16.67■□□□□ 0.26
DDX55-201ENST00000238146 WNT8AQ9H1J5 351 aa16.67■□□□□ 0.26
DDX55-201ENST00000238146 UBE2TQ9NPD8 197 aaPredicted RBP16.67■□□□□ 0.26
DDX55-201ENST00000238146 BCS1LQ9Y276 419 aa16.67■□□□□ 0.26
DDX55-201ENST00000238146 ACSL3O95573 720 aa16.66■□□□□ 0.26
DDX55-201ENST00000238146 KRT16P08779 473 aa16.66■□□□□ 0.26
DDX55-201ENST00000238146 BCRP11274 1271 aa16.66■□□□□ 0.26
DDX55-201ENST00000238146 BFSP1Q12934 665 aa16.66■□□□□ 0.26
DDX55-201ENST00000238146 SHROOM1Q2M3G4 852 aaPredicted RBP16.66■□□□□ 0.26
DDX55-201ENST00000238146 USH1GQ495M9 461 aa16.66■□□□□ 0.26
DDX55-201ENST00000238146 SLFN13Q68D06 897 aa16.66■□□□□ 0.26
DDX55-201ENST00000238146 TPH2Q8IWU9 490 aa16.66■□□□□ 0.26
DDX55-201ENST00000238146 AMNQ9BXJ7 453 aa16.66■□□□□ 0.26
DDX55-201ENST00000238146 MLXIPLQ9NP71 852 aa16.66■□□□□ 0.26
DDX55-201ENST00000238146 NOP53Q9NZM5 478 aaKnown RBP16.66■□□□□ 0.26
DDX55-201ENST00000238146 MTUS1Q9ULD2 1270 aa16.66■□□□□ 0.26
DDX55-201ENST00000238146 SLITRK3O94933 977 aa16.66■□□□□ 0.26
DDX55-201ENST00000238146 FOSP01100 380 aaPredicted RBP16.66■□□□□ 0.26
DDX55-201ENST00000238146 EEF2P13639 858 aaKnown RBP16.66■□□□□ 0.26
DDX55-201ENST00000238146 TAL1P17542 331 aaPredicted RBP16.66■□□□□ 0.26
DDX55-201ENST00000238146 RFX1P22670 979 aa16.66■□□□□ 0.26
DDX55-201ENST00000238146 RRP1BQ14684 758 aaKnown RBP16.66■□□□□ 0.26
DDX55-201ENST00000238146 EP400NLQ6ZTU2 488 aa16.66■□□□□ 0.26
DDX55-201ENST00000238146 RPUSD2Q8IZ73 545 aaKnown RBP16.66■□□□□ 0.26
DDX55-201ENST00000238146 SERPINB12Q96P63 405 aa16.66■□□□□ 0.26
DDX55-201ENST00000238146 TRIM6Q9C030 488 aaPredicted RBP16.66■□□□□ 0.26
DDX55-201ENST00000238146 ARHGEF3Q9NR81 526 aa16.66■□□□□ 0.26
DDX55-201ENST00000238146 PNMA3Q9UL41 463 aa16.66■□□□□ 0.26
DDX55-201ENST00000238146 A8MUI8 341 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 FOXO6A8MYZ6 492 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 ATMINO43313 823 aaPredicted RBP16.65■□□□□ 0.26
DDX55-201ENST00000238146 GJB6O95452 261 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 CALCOCO2Q13137 446 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 MKRN4PQ13434 485 aaPredicted RBP16.65■□□□□ 0.26
DDX55-201ENST00000238146 MIGA2Q7L4E1 593 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 ARHGEF19Q8IW93 802 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 FAM178BQ8IXR5 827 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 FITM2Q8N6M3 262 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 DCAF4Q8WV16 495 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 PCDHB18PQ96TA0 734 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 DNAJC18Q9H819 358 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 ARL2BPQ9Y2Y0 163 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 STRCQ7RTU9 1775 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 EXOC3O60645 756 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 CCND1P24385 295 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 HOXA13P31271 388 aaPredicted RBP16.65■□□□□ 0.26
DDX55-201ENST00000238146 MPP2Q14168 576 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 SPATA21Q7Z572 469 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 KCTD17Q8N5Z5 321 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 CKAP2Q8WWK9 683 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 DYDC2Q96IM9 177 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 CRAMP1Q96RY5 1269 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 CTNNAL1Q9UBT7 734 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 NRAPQ86VF7 1730 aa16.65■□□□□ 0.26
DDX55-201ENST00000238146 DIAPH2O60879 1101 aa16.64■□□□□ 0.26
DDX55-201ENST00000238146 NEBLO76041 1014 aa16.64■□□□□ 0.26
DDX55-201ENST00000238146 MTA2O94776 668 aa16.64■□□□□ 0.26
DDX55-201ENST00000238146 ECEL1O95672 775 aa16.64■□□□□ 0.26
DDX55-201ENST00000238146 ZNF76P36508 570 aa16.64■□□□□ 0.26
DDX55-201ENST00000238146 DLG4P78352 724 aa16.64■□□□□ 0.26
DDX55-201ENST00000238146 MAP2K1Q02750 393 aaPredicted RBP16.64■□□□□ 0.26
DDX55-201ENST00000238146 DHX37Q8IY37 1157 aaKnown RBP16.64■□□□□ 0.26
DDX55-201ENST00000238146 SPICE1Q8N0Z3 855 aa16.64■□□□□ 0.26
DDX55-201ENST00000238146 ANKRD42Q8N9B4 389 aa16.64■□□□□ 0.26
DDX55-201ENST00000238146 C12orf50Q8NA57 414 aaPredicted RBP16.64■□□□□ 0.26
DDX55-201ENST00000238146 MORC4Q8TE76 937 aa16.64■□□□□ 0.26
DDX55-201ENST00000238146 MKL1Q969V6 931 aa16.64■□□□□ 0.26
DDX55-201ENST00000238146 BTBD6Q96KE9 485 aa16.64■□□□□ 0.26
DDX55-201ENST00000238146 ZNF570Q96NI8 536 aa16.64■□□□□ 0.26
DDX55-201ENST00000238146 KCNK9Q9NPC2 374 aa16.64■□□□□ 0.26
DDX55-201ENST00000238146 BATF3Q9NR55 127 aa16.64■□□□□ 0.26
DDX55-201ENST00000238146 PRKAG3Q9UGI9 489 aa16.64■□□□□ 0.26
DDX55-201ENST00000238146 GREB1LQ9C091 1923 aaPredicted RBP16.64■□□□□ 0.25
DDX55-201ENST00000238146 UBE4BO95155 1302 aa16.64■□□□□ 0.25
DDX55-201ENST00000238146 O00370 1275 aa16.64■□□□□ 0.25
DDX55-201ENST00000238146 GH1P01241 217 aa16.64■□□□□ 0.25
DDX55-201ENST00000238146 HLA-DOAP06340 250 aa16.64■□□□□ 0.25
DDX55-201ENST00000238146 PRR5LQ6MZQ0 368 aa16.64■□□□□ 0.25
DDX55-201ENST00000238146 BZW1Q7L1Q6 419 aaKnown RBP16.64■□□□□ 0.25
DDX55-201ENST00000238146 ASRGL1Q7L266 308 aa16.64■□□□□ 0.25
DDX55-201ENST00000238146 OTOP1Q7RTM1 612 aa16.64■□□□□ 0.25
DDX55-201ENST00000238146 FBXO11Q86XK2 927 aa16.64■□□□□ 0.25
DDX55-201ENST00000238146 CERS5Q8N5B7 392 aa16.64■□□□□ 0.25
DDX55-201ENST00000238146 CCDC17Q96LX7 622 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms