RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 SH2B2O14492 632 aaPredicted RBP2.56□□□□□ -2
PRKD3-201ENST00000234179 ZBTB43O43298 467 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 PRC1O43663 620 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 ZC3H11AO75152 810 aaKnown RBP eCLIP2.56□□□□□ -2
PRKD3-201ENST00000234179 MAFO75444 373 aaPredicted RBP2.56□□□□□ -2
PRKD3-201ENST00000234179 RHOBTB1O94844 696 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 MUTP22033 750 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 ELF1P32519 619 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 HOXD12P35452 270 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 METAP2P50579 478 aaKnown RBP eCLIP2.56□□□□□ -2
PRKD3-201ENST00000234179 ATXN1P54253 815 aaKnown RBP2.56□□□□□ -2
PRKD3-201ENST00000234179 ACAP1Q15027 740 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 FAM102BQ5T8I3 360 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 DAB2IPQ5VWQ8 1189 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 USP17L6PQ6QN14 398 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 KRT25Q7Z3Z0 450 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 HEATR3Q7Z4Q2 680 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 ZBTB8OSQ8IWT0 167 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 ZKSCAN3Q9BRR0 538 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 ADPGKQ9BRR6 497 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 NRDE2Q9H7Z3 1164 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 VPS45Q9NRW7 570 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 PRMT7Q9NVM4 692 aaPredicted RBP2.56□□□□□ -2
PRKD3-201ENST00000234179 HSFX1Q9UBD0 423 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 CIZ1Q9ULV3 898 aaPredicted RBP2.56□□□□□ -2
PRKD3-201ENST00000234179 PIN4Q9Y237 131 aaKnown RBP2.56□□□□□ -2
PRKD3-201ENST00000234179 SMCO2A6NFE2 343 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 E9PAM4 449 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 N4BP3O15049 544 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 PPFIA3O75145 1194 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 OFD1O75665 1012 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 CDKL5O76039 1030 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 LYPLA2O95372 231 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 SLC11A1P49279 550 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 AK2P54819 239 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 SMARCB1Q12824 385 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 TUSC3Q13454 348 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 RAB33AQ14088 237 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 KIZQ2M2Z5 673 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 DCAF4L1Q3SXM0 396 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 ARHGAP29Q52LW3 1261 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 SLC44A4Q53GD3 710 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 IQCEQ6IPM2 695 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 SWSAP1Q6NVH7 229 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 CWC27Q6UX04 472 aaKnown RBP2.56□□□□□ -2
PRKD3-201ENST00000234179 ANKS3Q6ZW76 656 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.56□□□□□ -2
PRKD3-201ENST00000234179 ZNF589Q86UQ0 364 aaPredicted RBP2.56□□□□□ -2
PRKD3-201ENST00000234179 WDR5BQ86VZ2 330 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 RNF168Q8IYW5 571 aaPredicted RBP2.56□□□□□ -2
PRKD3-201ENST00000234179 RNF169Q8NCN4 708 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 EXOC6Q8TAG9 804 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 PHOX2BQ99453 314 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 PI4K2AQ9BTU6 479 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 KIF9Q9HAQ2 790 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 TRPV4Q9HBA0 871 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 ANKEF1Q9NU02 776 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 HCSTQ9UBK5 93 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 GABBR1Q9UBS5 961 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 SAMM50Q9Y512 469 aa2.56□□□□□ -2
PRKD3-201ENST00000234179 E7EWF7 191 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 XPOTO43592 962 aaKnown RBP2.55□□□□□ -2
PRKD3-201ENST00000234179 ATP9AO75110 1047 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 EPCAMP16422 314 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 PTGS1P23219 599 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 CXCL12P48061 93 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 PRKCEQ02156 737 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 CSTF1Q05048 431 aaKnown RBP2.55□□□□□ -2
PRKD3-201ENST00000234179 DSC1Q08554 894 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 HSP90AA2PQ14568 343 aaPredicted RBP2.55□□□□□ -2
PRKD3-201ENST00000234179 TARBP2Q15633 366 aaKnown RBP2.55□□□□□ -2
PRKD3-201ENST00000234179 Q4G0T1 1027 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 CLLU1OSQ5K130 101 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 CYP4A22Q5TCH4 519 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 TMC5Q6UXY8 1006 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 CACNA2D4Q7Z3S7 1137 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 YAF2Q8IY57 180 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 CAMKK1Q8N5S9 505 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 MCPH1Q8NEM0 835 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 WASF1Q92558 559 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 SLC5A5Q92911 643 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 RNF26Q9BY78 433 aaPredicted RBP2.55□□□□□ -2
PRKD3-201ENST00000234179 TRIM6Q9C030 488 aaPredicted RBP2.55□□□□□ -2
PRKD3-201ENST00000234179 ZMYND12Q9H0C1 365 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 CSRNP2Q9H175 543 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 CHST7Q9NS84 486 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 SUCLA2Q9P2R7 463 aaPredicted RBP2.55□□□□□ -2
PRKD3-201ENST00000234179 COL4A3BPQ9Y5P4 624 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 DDX49Q9Y6V7 483 aaKnown RBP2.55□□□□□ -2
PRKD3-201ENST00000234179 KIAA1671Q9BY89 1806 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 NID2Q14112 1375 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 LOXHD1Q8IVV2 1947 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 CCDC195A0A1B0GUA6 201 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 H0YCG3 227 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 CYTH3O43739 400 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 ZNF862O60290 1169 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 MGEA5O60502 916 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 EPN2O95208 641 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 FGFR1P11362 822 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 PTPN2P17706 415 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms