RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 A0A1B0GTH6 734 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 SNX2O60749 519 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 LONRF1Q17RB8 773 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 PDCD6IPQ8WUM4 868 aaKnown RBP14.21□□□□□ -0.13
NEK4-201ENST00000233027 SLC9A2Q9UBY0 812 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 ZNF609O15014 1411 aa14.21□□□□□ -0.14
NEK4-201ENST00000233027 MDH1P40925 334 aaKnown RBP14.21□□□□□ -0.14
NEK4-201ENST00000233027 ALDH18A1P54886 795 aaKnown RBP14.21□□□□□ -0.14
NEK4-201ENST00000233027 ZNF302Q9NR11 478 aa14.21□□□□□ -0.14
NEK4-201ENST00000233027 DBR1Q9UK59 544 aaKnown RBP14.21□□□□□ -0.14
NEK4-201ENST00000233027 STRIP2Q9ULQ0 834 aa14.21□□□□□ -0.14
NEK4-201ENST00000233027 AXIN2Q9Y2T1 843 aa14.21□□□□□ -0.14
NEK4-201ENST00000233027 PREX2Q70Z35 1606 aa14.21□□□□□ -0.14
NEK4-201ENST00000233027 DNAJC6O75061 913 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 ADORA2BP29275 332 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 KCNA1Q09470 495 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 RHOT1Q8IXI2 618 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 BEGAINQ9BUH8 593 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 CD209Q9NNX6 404 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 SARS2Q9NP81 518 aaKnown RBP14.2□□□□□ -0.14
NEK4-201ENST00000233027 FEM1BQ9UK73 627 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 TRIM33Q9UPN9 1127 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 PAPOLAP51003 745 aaKnown RBP14.2□□□□□ -0.14
NEK4-201ENST00000233027 DPYDQ12882 1025 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 TEX2Q8IWB9 1127 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 CALR3Q96L12 384 aaKnown RBP14.2□□□□□ -0.14
NEK4-201ENST00000233027 ZBTB18Q99592 522 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 ING2Q9H160 280 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 EPN3Q9H201 632 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 NDE1Q9NXR1 346 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 FXR1P51114 621 aaKnown RBP eCLIP14.2□□□□□ -0.14
NEK4-201ENST00000233027 GRAMD4Q6IC98 578 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 SNRNP48Q6IEG0 339 aaKnown RBP14.2□□□□□ -0.14
NEK4-201ENST00000233027 MCPH1Q8NEM0 835 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 SLC30A5Q8TAD4 765 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 SLC35G2Q8TBE7 412 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 IFT43Q96FT9 208 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 EDEM3Q9BZQ6 932 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 KIAA1586Q9HCI6 787 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 TRIM66O15016 1216 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 C21orf2O43822 256 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 NFX1Q12986 1120 aaKnown RBP14.2□□□□□ -0.14
NEK4-201ENST00000233027 CUL3Q13618 768 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 STXBP2Q15833 593 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 HEATR6Q6AI08 1181 aaKnown RBP14.2□□□□□ -0.14
NEK4-201ENST00000233027 SYCE1LA8MT33 242 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 PHF20L1A8MW92 1017 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 DHX34Q14147 1143 aaKnown RBP14.2□□□□□ -0.14
NEK4-201ENST00000233027 ALX1Q15699 326 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 SRLQ86TD4 932 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.2□□□□□ -0.14
NEK4-201ENST00000233027 TSPOAP1O95153 1857 aa14.2□□□□□ -0.14
NEK4-201ENST00000233027 CLTCL1P53675 1640 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 P4HBP07237 508 aaKnown RBP14.19□□□□□ -0.14
NEK4-201ENST00000233027 RCAN1P53805 252 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 DEUP1Q05D60 604 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 EFTUD2Q15029 972 aaKnown RBP eCLIP14.19□□□□□ -0.14
NEK4-201ENST00000233027 CCDC90BQ9GZT6 254 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 HPCAL4Q9UM19 191 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 ENO1P06733 434 aaKnown RBP14.19□□□□□ -0.14
NEK4-201ENST00000233027 PYGBP11216 843 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 SDC4P31431 198 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 QARSP47897 775 aaKnown RBP14.19□□□□□ -0.14
NEK4-201ENST00000233027 SZRD1Q7Z422 152 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 SPATA21Q7Z572 469 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 ICA1LQ8NDH6 482 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 ANP32DO95626 131 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 MYCP01106 439 aaPredicted RBP14.19□□□□□ -0.14
NEK4-201ENST00000233027 MYBL1P10243 752 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 SMARCA1P28370 1054 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 MORF4L2Q15014 288 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 FAM102AQ5T9C2 384 aaPredicted RBP14.19□□□□□ -0.14
NEK4-201ENST00000233027 SGMS1Q86VZ5 419 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 FAM217BQ9NTX9 383 aaPredicted RBP14.19□□□□□ -0.14
NEK4-201ENST00000233027 TFR2Q9UP52 801 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 ABCA8O94911 1581 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 CFAP73A6NFT4 308 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 TBXAS1P24557 533 aaPredicted RBP14.19□□□□□ -0.14
NEK4-201ENST00000233027 NBPF10Q6P3W6 841 aaKnown RBP14.19□□□□□ -0.14
NEK4-201ENST00000233027 GPD1LQ8N335 351 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 ATP11CQ8NB49 1132 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 RGL1Q9NZL6 768 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 MED14O60244 1454 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 RAD9BQ6WBX8 426 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 RASGRP2Q7LDG7 609 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 FRMD5Q7Z6J6 570 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 DHX35Q9H5Z1 703 aaKnown RBP14.19□□□□□ -0.14
NEK4-201ENST00000233027 TBC1D22BQ9NU19 505 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 PLA2R1Q13018 1463 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 GLI2P10070 1586 aa14.19□□□□□ -0.14
NEK4-201ENST00000233027 ADCY10Q96PN6 1610 aa14.18□□□□□ -0.14
NEK4-201ENST00000233027 ECE2O60344 883 aa14.18□□□□□ -0.14
NEK4-201ENST00000233027 ATG9AQ7Z3C6 839 aa14.18□□□□□ -0.14
NEK4-201ENST00000233027 DTX3LQ8TDB6 740 aa14.18□□□□□ -0.14
NEK4-201ENST00000233027 RBM12Q9NTZ6 932 aaKnown RBP14.18□□□□□ -0.14
NEK4-201ENST00000233027 DDX56Q9NY93 547 aaKnown RBP14.18□□□□□ -0.14
NEK4-201ENST00000233027 COL15A1P39059 1388 aa14.18□□□□□ -0.14
NEK4-201ENST00000233027 RNF103-CHMP3A0A140T963 221 aa14.18□□□□□ -0.14
NEK4-201ENST00000233027 ASNSP08243 561 aa14.18□□□□□ -0.14
NEK4-201ENST00000233027 KDSRQ06136 332 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms