RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 ACTR2P61160 394 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 ZBED6P86452 979 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 SP2Q02086 613 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 MTF1Q14872 753 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 TCERG1LQ5VWI1 586 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 OTUD6AQ7L8S5 288 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 CCDC60Q8IWA6 550 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 CHCHD4Q8N4Q1 142 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 CCDC155Q8N6L0 562 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 PLPP7Q8NBV4 271 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 ZNF397Q8NF99 534 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 PPM1EQ8WY54 764 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 ERP27Q96DN0 273 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 PPP1R13BQ96KQ4 1090 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 CEP170P1Q96L14 293 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 DESI2Q9BSY9 194 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 NUP58Q9BVL2 599 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 NAA15Q9BXJ9 866 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 GBA2Q9HCG7 927 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 GPRC5CQ9NQ84 441 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 AGPAT5Q9NUQ2 364 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 TYW1Q9NV66 732 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 DBR1Q9UK59 544 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 MCM3APO60318 1980 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 BRCA2P51587 3418 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 WDR81Q562E7 1941 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 CCL15-CCL14A0A0B4J2E2 113 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 SPATA31C2B4DYI2 1134 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 EIF3DO15371 548 aaKnown RBP eCLIP5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 ZNF862O60290 1169 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 DKC1O60832 514 aaKnown RBP eCLIP5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 LYPLA2O95372 231 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 BPNT1O95861 308 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 NR3C1P04150 777 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 XRCC5P13010 732 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 HOXD13P35453 343 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 PEX3P56589 373 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 ERVK-9P63128 1117 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 ERVK-24P63145 666 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 CCL15Q16663 113 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 DCAF17Q5H9S7 520 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 FAM102BQ5T8I3 360 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 PDXDC1Q6P996 788 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 TOGARAM2Q6ZUX3 1019 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 ANO5Q75V66 913 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 EPM2AIP1Q7L775 607 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 ATCAYQ86WG3 371 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 DAW1Q8N136 415 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 C2orf69Q8N8R5 385 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 CCDC89Q8N998 374 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 FAM133AQ8N9E0 248 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 RDM1Q8NG50 284 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 OR8K1Q8NGG5 319 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 GTF3C2Q8WUA4 911 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 CCDC51Q96ER9 411 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 ERGIC2Q96RQ1 377 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 FIZ1Q96SL8 496 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 CRACR2AQ9BSW2 395 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 SAP130Q9H0E3 1048 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 GBP3Q9H0R5 595 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 PRM3Q9NNZ6 103 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 ARMCX3Q9UH62 379 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 CAPN11Q9UMQ6 739 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 PPP2R2CQ9Y2T4 447 aa5.88□□□□□ -1.47
TRAPPC13-201ENST00000231526 TMEM238LA0A1B0GVL6 79 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 ZBBXA8MT70 800 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 PDHXO00330 501 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 AKAP3O75969 853 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 CCDC175P0C221 793 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 EPB41P11171 864 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 MAPK1P28482 360 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 MAPK7Q13164 816 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 MOGSQ13724 837 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 RAPGEF1Q13905 1077 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 GPAT2Q6NUI2 795 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 MIS18BP1Q6P0N0 1132 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 CYP26C1Q6V0L0 522 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 CACNA2D4Q7Z3S7 1137 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 ANKRD13CQ8N6S4 541 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 MMP19Q99542 508 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 CHP1Q99653 195 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 PORCNQ9H237 461 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 IKZF4Q9H2S9 585 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 EFCC1Q9HA90 598 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 MLXIPQ9HAP2 919 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 ZNHIT6Q9NWK9 470 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 TELO2Q9Y4R8 837 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 PCDHGB7Q9Y5F8 929 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 NFASCO94856 1347 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 ZNFX1Q9P2E3 1918 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 SOWAHBA6NEL2 793 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 CCDC169A6NNP5 214 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 TGFB1I1O43294 461 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 CNMDO75829 334 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 DKK1O94907 266 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 CETPP11597 493 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 UBA1P22314 1058 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 CASP4P49662 377 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 CYP2J2P51589 502 aa5.87□□□□□ -1.47
TRAPPC13-201ENST00000231526 GTF2A2P52657 109 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms