RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 RGPD5Q99666 1765 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 CCDC188H7C350 402 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 PDHXO00330 501 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 P4HA2O15460 535 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 SLITRK3O94933 977 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 ECEL1O95672 775 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 PSMA2P25787 234 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 NCOA4Q13772 614 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 ATF7IP2Q5U623 682 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 PARD6BQ9BYG5 372 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 RRAGCQ9HB90 399 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 BLOC1S4Q9NUP1 217 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 PIK3CDO00329 1044 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 RGS16O15492 202 aaPredicted RBP16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 SNHG28P0DPA3 235 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 ARL4AP40617 200 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 NPTX2P47972 431 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 PPP2R5CQ13362 524 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 RAD9BQ6WBX8 426 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 CATSPERGQ6ZRH7 1159 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 RFFLQ8WZ73 363 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 PPANQ9NQ55 473 aaKnown RBP16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 A0A1W2PQJ5 194 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 ZRANB2O95218 330 aaKnown RBP eCLIP16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 ZNF720Q7Z2F6 126 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 CTAGE3PQ8IX95 158 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 TAB3Q8N5C8 712 aaPredicted RBP16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 AP1M1Q9BXS5 423 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 OLFML3Q9NRN5 406 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 KCNH4Q9UQ05 1017 aa16.92■□□□□ 0.3
TMEM30A-201ENST00000230461 EVI5O60447 810 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 SRGAP2O75044 1071 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 VIMP08670 466 aaKnown RBP16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 ARPP19P56211 112 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 CDKAL1Q5VV42 579 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 KCTD6Q8NC69 237 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 ZNF564Q8TBZ8 553 aaPredicted RBP16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 TMEM8AQ9HCN3 771 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 SAMD15Q9P1V8 674 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 SCN11AQ9UI33 1791 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 SGK1O00141 431 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 EXTL3O43909 919 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 RGS2P41220 211 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 RARRES1P49788 294 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 EPHB4P54760 987 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 IRX5P78411 483 aaPredicted RBP16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 E2F4Q16254 413 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 P3H4Q92791 437 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 DBR1Q9UK59 544 aaKnown RBP16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 KDM3BQ7LBC6 1761 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 IRF6O14896 467 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 CNTN2Q02246 1040 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 DIS3Q9Y2L1 958 aaKnown RBP16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 EML1O00423 815 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 KLK7P49862 253 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 DYNLT1P63172 113 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 SHROOM1Q2M3G4 852 aaPredicted RBP16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 ZNF560Q96MR9 790 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 IRX2Q9BZI1 471 aaPredicted RBP16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 CPA4Q9UI42 421 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 AGAP1Q9UPQ3 857 aa16.91■□□□□ 0.3
TMEM30A-201ENST00000230461 MCF2LO15068 1137 aa16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 STRNO43815 780 aa16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 SLC26A2P50443 739 aa16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 PLTPP55058 493 aa16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 TMEM62Q0P6H9 643 aa16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 KLHDC7AQ5VTJ3 777 aa16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 NUP85Q9BW27 656 aa16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 PDGFDQ9GZP0 370 aaPredicted RBP16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 PRKAG2Q9UGJ0 569 aa16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 MKRN1Q9UHC7 482 aaKnown RBP16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 RARBP10826 455 aa16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 ARL1P40616 181 aaPredicted RBP16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 SH3RF1Q7Z6J0 888 aa16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 KCNMB3Q9NPA1 279 aa16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 NLRP11P59045 1033 aaKnown RBP16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 RBP5P82980 135 aa16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 PPIL2Q13356 520 aa16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 KIAA0895Q8NCT3 520 aa16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 UHMK1Q8TAS1 419 aaKnown RBP16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 HAS1Q92839 578 aa16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 WDR24Q96S15 920 aa16.9■□□□□ 0.3
TMEM30A-201ENST00000230461 HLA-DRAP01903 254 aa16.89■□□□□ 0.3
TMEM30A-201ENST00000230461 ZNF18P17022 549 aa16.89■□□□□ 0.3
TMEM30A-201ENST00000230461 NAMPTP43490 491 aa16.89■□□□□ 0.3
TMEM30A-201ENST00000230461 ALDH5A1P51649 535 aaPredicted RBP16.89■□□□□ 0.3
TMEM30A-201ENST00000230461 SGSM1Q2NKQ1 1148 aa16.89■□□□□ 0.3
TMEM30A-201ENST00000230461 SYNGAP1Q96PV0 1343 aa16.89■□□□□ 0.29
TMEM30A-201ENST00000230461 M0QYV0 167 aa16.89■□□□□ 0.29
TMEM30A-201ENST00000230461 PHBP35232 272 aa16.89■□□□□ 0.29
TMEM30A-201ENST00000230461 CPT1AP50416 773 aa16.89■□□□□ 0.29
TMEM30A-201ENST00000230461 FCGRTP55899 365 aa16.89■□□□□ 0.29
TMEM30A-201ENST00000230461 CDO1Q16878 200 aa16.89■□□□□ 0.29
TMEM30A-201ENST00000230461 ZNF484Q5JVG2 852 aa16.89■□□□□ 0.29
TMEM30A-201ENST00000230461 SH3BP5LQ7L8J4 393 aa16.89■□□□□ 0.29
TMEM30A-201ENST00000230461 KCNK18Q7Z418 384 aa16.89■□□□□ 0.29
TMEM30A-201ENST00000230461 VSIG10LQ86VR7 867 aa16.89■□□□□ 0.29
TMEM30A-201ENST00000230461 PRPF31Q8WWY3 499 aaKnown RBP16.89■□□□□ 0.29
TMEM30A-201ENST00000230461 KLRG1Q96E93 195 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms