RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 KAT5Q92993 513 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 C18orf8Q96DM3 657 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 RPS6KC1Q96S38 1066 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 PCDHB18PQ96TA0 734 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 COL20A1Q9P218 1284 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 SNX24Q9Y343 169 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 TMEM110-MUSTN1A8MSY1 372 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 CHRNB2P17787 502 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 CTNNA2P26232 953 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 CHRNA5P30532 468 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 MXI1P50539 228 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 HOOK3Q86VS8 718 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 IL31RAQ8NI17 732 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 FBXO25Q8TCJ0 367 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 RAPGEF5Q92565 580 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 PABPC3Q9H361 631 aaKnown RBP17.54■□□□□ 0.4
LTBR-201ENST00000228918 GRHL1Q9NZI5 618 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 ZNF70Q9UC06 446 aaPredicted RBP17.54■□□□□ 0.4
LTBR-201ENST00000228918 PCYOX1Q9UHG3 505 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 NOCTQ9UK39 431 aaKnown RBP17.54■□□□□ 0.4
LTBR-201ENST00000228918 USP20Q9Y2K6 914 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 ZNFX1Q9P2E3 1918 aaKnown RBP17.54■□□□□ 0.4
LTBR-201ENST00000228918 C5orf60A6NFR6 353 aa17.53■□□□□ 0.4
LTBR-201ENST00000228918 PMM2O15305 246 aa17.53■□□□□ 0.4
LTBR-201ENST00000228918 PEX5P50542 639 aa17.53■□□□□ 0.4
LTBR-201ENST00000228918 PMS2P54278 862 aa17.53■□□□□ 0.4
LTBR-201ENST00000228918 PLTPP55058 493 aa17.53■□□□□ 0.4
LTBR-201ENST00000228918 GSCP56915 257 aaPredicted RBP17.53■□□□□ 0.4
LTBR-201ENST00000228918 NOP9Q86U38 636 aaKnown RBP17.53■□□□□ 0.4
LTBR-201ENST00000228918 ZDHHC14Q8IZN3 488 aa17.53■□□□□ 0.4
LTBR-201ENST00000228918 TMEM117Q9H0C3 514 aa17.53■□□□□ 0.4
LTBR-201ENST00000228918 PPIP5K2O43314 1243 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 CAND2O75155 1236 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 SGPL1O95470 568 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 GGPS1O95749 300 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 SHBGP04278 402 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 GZMAP12544 262 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 COMTP21964 271 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 GTF2BQ00403 316 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 IFT88Q13099 833 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 TNIP1Q15025 636 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 QPCTQ16769 361 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 SEL1L2Q5TEA6 688 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 KCNV1Q6PIU1 500 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 NIPA1Q7RTP0 329 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 FAM71AQ8IYT1 594 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 CD101Q93033 1021 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 CNKSR1Q969H4 720 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 AGBL1Q96MI9 1066 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 GLIS2Q9BZE0 524 aaPredicted RBP17.52■□□□□ 0.4
LTBR-201ENST00000228918 ST6GALNAC4Q9H4F1 302 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 CNOT10Q9H9A5 744 aaKnown RBP17.52■□□□□ 0.4
LTBR-201ENST00000228918 DDX20Q9UHI6 824 aaKnown RBP17.52■□□□□ 0.4
LTBR-201ENST00000228918 CCPG1Q9ULG6 757 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 ZNF536O15090 1300 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 ICAM1P05362 532 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 ADRB2P07550 413 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 USP8P40818 1118 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 PTGER2P43116 358 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 MESDQ14696 234 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 RNF187Q5TA31 235 aaPredicted RBP17.52■□□□□ 0.4
LTBR-201ENST00000228918 TTC27Q6P3X3 843 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 HAUS6Q7Z4H7 955 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 CCDC91Q7Z6B0 441 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 MORC4Q8TE76 937 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 KREMEN1Q96MU8 473 aa17.52■□□□□ 0.4
LTBR-201ENST00000228918 AGO4Q9HCK5 861 aaKnown RBP17.52■□□□□ 0.4
LTBR-201ENST00000228918 ATMINO43313 823 aaPredicted RBP17.51■□□□□ 0.39
LTBR-201ENST00000228918 LYPLA2O95372 231 aa17.51■□□□□ 0.39
LTBR-201ENST00000228918 ALAS1P13196 640 aa17.51■□□□□ 0.39
LTBR-201ENST00000228918 GBP1P32455 592 aa17.51■□□□□ 0.39
LTBR-201ENST00000228918 CAP2P40123 477 aa17.51■□□□□ 0.39
LTBR-201ENST00000228918 QARSP47897 775 aaKnown RBP17.51■□□□□ 0.39
LTBR-201ENST00000228918 SNRPFP62306 86 aaKnown RBP17.51■□□□□ 0.39
LTBR-201ENST00000228918 DENND2CQ68D51 928 aa17.51■□□□□ 0.39
LTBR-201ENST00000228918 CDAN1Q8IWY9 1227 aa17.51■□□□□ 0.39
LTBR-201ENST00000228918 RNF25Q96BH1 459 aaPredicted RBP17.51■□□□□ 0.39
LTBR-201ENST00000228918 WNT8AQ9H1J5 351 aa17.51■□□□□ 0.39
LTBR-201ENST00000228918 CHORDC1Q9UHD1 332 aaPredicted RBP17.51■□□□□ 0.39
LTBR-201ENST00000228918 TRPC6Q9Y210 931 aa17.51■□□□□ 0.39
LTBR-201ENST00000228918 PCDHA3Q9Y5H8 950 aa17.51■□□□□ 0.39
LTBR-201ENST00000228918 PODXLO00592 558 aa17.51■□□□□ 0.39
LTBR-201ENST00000228918 NFIBO00712 420 aa17.51■□□□□ 0.39
LTBR-201ENST00000228918 HNRNPH1P31943 449 aaKnown RBP17.51■□□□□ 0.39
LTBR-201ENST00000228918 RPL21P46778 160 aaKnown RBP17.51■□□□□ 0.39
LTBR-201ENST00000228918 MCCD1P59942 119 aaPredicted RBP17.51■□□□□ 0.39
LTBR-201ENST00000228918 SPP2Q13103 211 aa17.51■□□□□ 0.39
LTBR-201ENST00000228918 TKFCQ3LXA3 575 aa17.51■□□□□ 0.39
LTBR-201ENST00000228918 ARMC9Q7Z3E5 817 aa17.51■□□□□ 0.39
LTBR-201ENST00000228918 PNMA2Q9UL42 364 aa17.51■□□□□ 0.39
LTBR-201ENST00000228918 UBIAD1Q9Y5Z9 338 aa17.51■□□□□ 0.39
LTBR-201ENST00000228918 PLSCR1O15162 318 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 NCKAP1LP55160 1127 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 FMO1Q01740 532 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 DRP2Q13474 957 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 BYSLQ13895 437 aaKnown RBP17.5■□□□□ 0.39
LTBR-201ENST00000228918 RASA3Q14644 834 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 CYP1B1Q16678 543 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 SPDYE2Q495Y8 402 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 RSBN1LQ6PCB5 846 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms